| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0918 |
|---|
| Symbol | |
|---|
| ID | 5708752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 962991 |
|---|
| End bp | 964058 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641275420 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540741 |
|---|
| Protein GI | 159041489 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGGT TCATGGTTAT TTCAGATGAC TTAACTGGTG CTAATGGTGT TGCCGGTATG
ATGAGTAAAC ACTGCAGTGT CATAGTTATT AACCATAGGC TAATTAAGCT GATCCCAGGT
GATGCTGAAT GCGTTGTCGT TAACACTGAA AGTAGGCTTA TTGAGCCAGA TATTGCTGAG
AGTAGGGTTA AGTCGGTTAT CAGTTACGCT GAGTATAATG GATTCATAAT TGGGAAGAGA
ATTGATAGTG CATTAAGGGG TAATATTGGG CCTGAGTTGA GGCCACTACT TAAGCGAACA
ATGGTTATCA CAGACACAAT ACCCGAGTAC GGTAGGTTCA CTGAGGGTGG TTTCACTATT
TTAGGCGACT CCAAGGTAAG TATACTTGAG AGACTTGGCG GTATTAGGGC TATGGTTACG
AGTATTAGGG GGCTTAAGGC TAATGCCAGT AATCTAAAAG GCGTGGTGAT TGTTGATTCA
AGAACAATGA GTGATATTGC TGAAATAGCC CAGGTAATAC ATGATAATGG CTTCACTGCA
GTGGATCCAG GGCCATTAAA TGCTCAAGTC GCCGGACTTT ATGTTAAAGG GAAGTTAAGT
AAACATACTA TTAATAGGGT TGAGAGAGTA TGCTTCATAA TTGGCAGTAC GCATGAGAAT
ACCATTAGGC AGATTGAGAG GGCTAAGAGG AACGGTATTA GGGTTATTAA CATCAGGGAT
TCAACTGATT TATCAAGTTA TGATAATGTA ATAATTAGCT TCGATCTAAT GAAGGATAAG
GATTACTTAA ATGAAGATTT CATAAAACAG GCAGCTCAAT TTGACGCATT AGTGGTGAGT
GGTGGTGAGA CTGCTAATTT ACTGATTAAT GTATCTAAGG CCAATTACCT AGAGTCAATA
GGTGAAGTAA TGCCCCTTGT TGGTGTAGGC TTAATTAGGG GAGGTTTACT TGATGGTAAG
ATCATTGTAA CTAAAGGAGG CATAATAGGG GGAGAGGACA CCTACTTAAT AATAAGGGAT
TACCTAAGAA GGTTACCTAA TGTTATTGAA AAGAACGAAA CAACATAA
|
|---|
| Protein sequence | MVRFMVISDD LTGANGVAGM MSKHCSVIVI NHRLIKLIPG DAECVVVNTE SRLIEPDIAE
SRVKSVISYA EYNGFIIGKR IDSALRGNIG PELRPLLKRT MVITDTIPEY GRFTEGGFTI
LGDSKVSILE RLGGIRAMVT SIRGLKANAS NLKGVVIVDS RTMSDIAEIA QVIHDNGFTA
VDPGPLNAQV AGLYVKGKLS KHTINRVERV CFIIGSTHEN TIRQIERAKR NGIRVINIRD
STDLSSYDNV IISFDLMKDK DYLNEDFIKQ AAQFDALVVS GGETANLLIN VSKANYLESI
GEVMPLVGVG LIRGGLLDGK IIVTKGGIIG GEDTYLIIRD YLRRLPNVIE KNETT
|
|---|
| |