Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0896 |
Symbol | |
ID | 5710433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 937118 |
End bp | 937891 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275398 |
Product | ABC transporter related |
Protein accession | YP_001540720 |
Protein GI | 159041468 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.152369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATTT CATTCAGTTA TAGGACTGAG AGGGGTCCCC TTCAGGTTCT TAGGGATGTC TCCTTCGCTG TTTATGAGAA GCAGTACGTA TCCATAGTGG CACCCACGGG TACTGGTAAG ACAACACTTC TAAGGATTAT AGCTGGGTTG AGGAAGCCGG ATACAGGTAA GGTAATACTA ATGGGTGAGG AGGTTAAGGG TCCAACGCCT AAGATCTCAA TGATATTCCA GGACTTCGCA TTATTCCCAT GGTTAACGGC CTTGGAGAAC GTGGAGATAG CCCTGCTTCA TAAGAAGCTT AGTAAGGAGG ATAGGGTTAA GTTAGCTAGA AAATACCTGG AATTAGTTGG ATTGGGTGGT TTTGAGAATT ATTACCCAAG GGAGTTGAGT GGTGGAATGA AGCAGAGGGT TGCCATTGCA AGGGCCTTAG CTGCTCAGCC CATTCTCCTA CTCATGGATG AGCCCTTCGC TAACCTTGAT GCCATAACCG CTGAGGGTCT TAAAAGTGAA ATATACAACA TGGTTTTTAA TGAGGAGTCA ACAGTTAAGG CAATAGTGAT GGTTAGCCAC AATCTCAGTG AGGTAATTGA ACTTAGTGAT AGGGTTATTG TGCTTGGTGG TAGGCCTGCA ACTGTGATTG CGGATATAAG TATTGACTTA CCTAGACCTA GGTCACCCAG GGATAAGGAG TTTCAGGAGT ACTTGGATAT GCTTTACAGT GAAATATCAA AATCCATGGA GCTCACCACT GCGGTTAAGG TGAATAGTAA ATGA
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Protein sequence | MDISFSYRTE RGPLQVLRDV SFAVYEKQYV SIVAPTGTGK TTLLRIIAGL RKPDTGKVIL MGEEVKGPTP KISMIFQDFA LFPWLTALEN VEIALLHKKL SKEDRVKLAR KYLELVGLGG FENYYPRELS GGMKQRVAIA RALAAQPILL LMDEPFANLD AITAEGLKSE IYNMVFNEES TVKAIVMVSH NLSEVIELSD RVIVLGGRPA TVIADISIDL PRPRSPRDKE FQEYLDMLYS EISKSMELTT AVKVNSK
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