Gene Cmaq_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0896 
Symbol 
ID5710433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp937118 
End bp937891 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID641275398 
ProductABC transporter related 
Protein accessionYP_001540720 
Protein GI159041468 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.152369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTT CATTCAGTTA TAGGACTGAG AGGGGTCCCC TTCAGGTTCT TAGGGATGTC 
TCCTTCGCTG TTTATGAGAA GCAGTACGTA TCCATAGTGG CACCCACGGG TACTGGTAAG
ACAACACTTC TAAGGATTAT AGCTGGGTTG AGGAAGCCGG ATACAGGTAA GGTAATACTA
ATGGGTGAGG AGGTTAAGGG TCCAACGCCT AAGATCTCAA TGATATTCCA GGACTTCGCA
TTATTCCCAT GGTTAACGGC CTTGGAGAAC GTGGAGATAG CCCTGCTTCA TAAGAAGCTT
AGTAAGGAGG ATAGGGTTAA GTTAGCTAGA AAATACCTGG AATTAGTTGG ATTGGGTGGT
TTTGAGAATT ATTACCCAAG GGAGTTGAGT GGTGGAATGA AGCAGAGGGT TGCCATTGCA
AGGGCCTTAG CTGCTCAGCC CATTCTCCTA CTCATGGATG AGCCCTTCGC TAACCTTGAT
GCCATAACCG CTGAGGGTCT TAAAAGTGAA ATATACAACA TGGTTTTTAA TGAGGAGTCA
ACAGTTAAGG CAATAGTGAT GGTTAGCCAC AATCTCAGTG AGGTAATTGA ACTTAGTGAT
AGGGTTATTG TGCTTGGTGG TAGGCCTGCA ACTGTGATTG CGGATATAAG TATTGACTTA
CCTAGACCTA GGTCACCCAG GGATAAGGAG TTTCAGGAGT ACTTGGATAT GCTTTACAGT
GAAATATCAA AATCCATGGA GCTCACCACT GCGGTTAAGG TGAATAGTAA ATGA
 
Protein sequence
MDISFSYRTE RGPLQVLRDV SFAVYEKQYV SIVAPTGTGK TTLLRIIAGL RKPDTGKVIL 
MGEEVKGPTP KISMIFQDFA LFPWLTALEN VEIALLHKKL SKEDRVKLAR KYLELVGLGG
FENYYPRELS GGMKQRVAIA RALAAQPILL LMDEPFANLD AITAEGLKSE IYNMVFNEES
TVKAIVMVSH NLSEVIELSD RVIVLGGRPA TVIADISIDL PRPRSPRDKE FQEYLDMLYS
EISKSMELTT AVKVNSK