| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0874 |
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| Symbol | |
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| ID | 5709715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 918100 |
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| End bp | 918771 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275377 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001540699 |
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| Protein GI | 159041447 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTATA GGCTTCATGT CTCCCTTATT CACCGTGGTG ATTGGAGTGA GTTGTCCCGT
AACTACCCTG GTTTAAGTGT GGTTGGTTTA TCGTCGTATG TTGTTAAGCC CAGTGAGCTT
ACCCTTGAGG TTGTTGCTGT TCATGCCTTG GATTCATCAT TAATTAGGGA TTTTACTCAT
GCATTAATGG GTGGGTTGGG TAATGTTGTT AAGGTGCTTT ATGTTAATAA TGTTTCACGT
AGGTACCGTG AGGTTGTCCT CCTAAGTGAG TATGATGGTG TTTTAAAATA CGTATTAATT
AATAATGGCT GCTTAACCGT TCAATCACGT GTTCATAATG GTGTTAAGGA GTTCACGGCA
TACTTCACGG ATAAGTCTAA TGCAGAGTCA TCATGCAGAG CCCTTACTAG GCGTGGTGAC
GTTGATTTAA TGAATTGCTC ACTGGTGAGG GTTAAGGGTG AGTCATTTAG TAATGGCTTA
TCCTTAGGCA CCATGTTAAC GCATAGGGAG CTTCAAGTAC TTAGGAGGGC TTATGAGGCC
GGTTTCTTCG ATGATACAAG GGGTATTGGG TTGAGTGAGT TGGCTAGGGA GTTTGGGCTC
TCCAAGTCTA CGGTTAGTCA CCACATAAGG TCGGCGGTTA GGAAGATAAT TAAATTATAC
TTAAGTAGGT GA
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| Protein sequence | MPYRLHVSLI HRGDWSELSR NYPGLSVVGL SSYVVKPSEL TLEVVAVHAL DSSLIRDFTH
ALMGGLGNVV KVLYVNNVSR RYREVVLLSE YDGVLKYVLI NNGCLTVQSR VHNGVKEFTA
YFTDKSNAES SCRALTRRGD VDLMNCSLVR VKGESFSNGL SLGTMLTHRE LQVLRRAYEA
GFFDDTRGIG LSELAREFGL SKSTVSHHIR SAVRKIIKLY LSR
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