| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0873 |
|---|
| Symbol | |
|---|
| ID | 5709714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 916766 |
|---|
| End bp | 918076 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641275376 |
|---|
| Product | actin/actin family protein |
|---|
| Protein accession | YP_001540698 |
|---|
| Protein GI | 159041446 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5277] Actin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGATG TTAGGTATAA GGCAAGGTTC GTCTACGCTG AGGATTACGG TACGGGCTAC
TTCAAGTATG GTCCAATAAC CCTAGGTGAG GTACCGAGGG TTATGCCCAG TAGAGGCTTA
TTGCTTAGGG ATCTGCCTGA AAGCATGAAG CTTCTCGTGC CTAGGGATGT TTTAAGTAGG
GGTGTTGTGG TTGGTGATGA GGTATCCAAG TACCTTAGCT CACTTAGGGA CGCCATAAGG
AACCTCAAGT ACCCTCTACA TGATGGGATA GTGAGGAGGG AGGATGAGGA TGCTTGGAGG
GTTGTTAGGG AGATGACTAG GTTCACTATT GCTCAATTCC ACAGTGAAGC CGTTAAGCAA
AGCGACTACA GGGGCTTCCT AATCGTGGCC GCATTATCGG CACTGGCGCC AGACTACATG
AAGGAGAGGT TTATTGAGCT TCACGGTGAC GTTAATAGGG AATTGGGCGG TAACGCCGTT
AGGGCTGTGA CTGTTATTGA CCAACCCTTC GCAGTGGCCA TAGCTGAGAA GGCTGTTACA
TGCATAGTTA TTGAGGCTGG TCACGGTAAT ACTCAGGTTG TTCCAATTAG CTACGGTCCA
ATTAGGGATG GTATAGTGGC CTTAAACAGG GGTGGGGCTG AGGCTAATGC AATAACCAGG
GAGGTTCTTA AGGACGCAGG CTACGGGGAC CTGGCTAGGG ATGATTACGT AGTTGAGGTT
GTTAAGAGGG AGGCCGGCTT AATCCCAAGG GACCTTGATG AAGCCATTAA TAAGGCTAAG
AAGGAGCCTG ATAAGTACGC GGTATCAGTT AAAGTTAACC CACTGGTGAC TATTGAGCTT
AAGGAGTACT CCTGGATGAG GTTCCTAATA GGGGAGATAC TCTTCAACCC GAATCATGAA
ATATTCAGAA GCTACACTCA ACAGGGTAGG TTAACCATAG AGGACGTGAC CGTTGGAGAC
ATGGTGTTCC ACGGTGAAAT GAGCCTATCA GACGCAGTGA TAAGTAGTGT TAGGAGGACA
CCAGTGGAGA TTCAGGATAA GGTGCTTGAA AACATAATAC TGAGTGGAGG CTCATTCAAC
TGGAAGACAC CACCGGAGGG TCTTAGGGAC GTTGCGGTAA CGAGTCCGGA GAAGGTTAAG
GTGATGATGA GTAAGTTGTC CCCTGAATTG GCTGAGAGGG TTAACGTTAG GTTGGTTAAT
GATCCCCAGT TCAGTGTTTG GAAGGGTTCA ATAGTTTATG GTTATGCACT ACCGCTTAAC
GTTAAGTGGA GTGAGAGGAC TAAGGAGGGT TGGTACTTCC TAAACCAGTG A
|
|---|
| Protein sequence | MEDVRYKARF VYAEDYGTGY FKYGPITLGE VPRVMPSRGL LLRDLPESMK LLVPRDVLSR
GVVVGDEVSK YLSSLRDAIR NLKYPLHDGI VRREDEDAWR VVREMTRFTI AQFHSEAVKQ
SDYRGFLIVA ALSALAPDYM KERFIELHGD VNRELGGNAV RAVTVIDQPF AVAIAEKAVT
CIVIEAGHGN TQVVPISYGP IRDGIVALNR GGAEANAITR EVLKDAGYGD LARDDYVVEV
VKREAGLIPR DLDEAINKAK KEPDKYAVSV KVNPLVTIEL KEYSWMRFLI GEILFNPNHE
IFRSYTQQGR LTIEDVTVGD MVFHGEMSLS DAVISSVRRT PVEIQDKVLE NIILSGGSFN
WKTPPEGLRD VAVTSPEKVK VMMSKLSPEL AERVNVRLVN DPQFSVWKGS IVYGYALPLN
VKWSERTKEG WYFLNQ
|
|---|
| |