Gene Cmaq_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0849 
Symbol 
ID5709537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp893585 
End bp894979 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content45% 
IMG OID641275352 
Productmajor facilitator transporter 
Protein accessionYP_001540674 
Protein GI159041422 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTGA ATTCACGTAA ATTAATCAAT TACCTTAAAC TATCATTAAG TGTAATATTG 
GGTAAAACTT TAATATTTAC ACACCTCCTA TTTTATATGA GTAGTGAGCT TAAGGTAAGT
GAGATAAACG TTAGGGCGTT GTTAGGTGGT ACAATAGGTT GGATGGTTGA TGTATTTGAT
TTAACACTCA TACTCTTCAT AGCCTCAATA ATTGGGGGAG CCTTCTTCCC TAAAACTAAC
CCCACTGCTC AATTACTCTA CGTATTCGCC TCATACTCCT TAACCCTCCT AGCCAGACCA
CTGGGTGGTA TTGTGTTCGG CCATGTTGCG GATAGGGTTG GTAGGAGGAT TACAATGTTA
ATAACCCTAA TCGGCCTCGG TGTATTCTCA GCATTAACGG GGGCATTACC GACGTATGCC
CAAGTGGGCT TAATCGCAAC TGCCTTATTC GTAACCCTTA GGCTAATTGT TGGAATATTC
GTTGGTGGTG AGGTCTCAGG CTCACACTTA ATAGCGGTGG AGAGTTCATC ACCCCGGTTT
AGGGGATTGG TTAGTGGTGT TATTGAAAGC GGCTACTACT GGGGTTACGC GTTAGCGGCA
TTAACATTCG CACTGCTTAG GGACTACTTT GGAACAAGTA ATTTCGTGGC CTTCGGCTGG
AGGTACGCCT TCCTAGTAGG TCTCGTGGTT GCTCTCATTG GGGTTATCCT TAGGTTGACT
GTTGATGACC CTGAAATCTA TAAGAGGGCT AAGGCAACAG GCAATATAGC GAAGATACCC
ATAGCTGAGT TATTTAAAGC CAGTACCAGG GATGCCTTAG TGGCCCTACT CCTATTAGCT
GGAATCTTCT GGGTGGCGTA CGCGACGCTG GGCTTCCTAC CAACATACCT CACAAGTTTC
ATGAAGCTAC CACTTAATGA AGCGTTCTGG GGGTTAGCGT ATGCATCCTT AATAGGTGGT
GTATTAACCA TAGCCGGTGG TGTGTTAAGC AATTACACTG GGAGGAGGAG GGCCTTCCTA
GTACTCATAG TGGTAGGCAT AGTGTTAGCG TATCCATTAA CCATTGCGCT TAAACTAGGC
TACACCTCAC TCATAATCTC AGCCGGTGTA TTAACAAGCG TAATAGGTAC TGGTGGTGTT
ATGCTGGCTT ACTTGGCTGA ATTATTCCCA ACAAGATTCA GGGGAAGTGC CGTTGGCTTC
CTATGGAATA TGGCTAGTAT TGGAGCCACT GGGGCCTTAT TAACCTCCCA GTACTGGTTA
AAGACCTTCG GTGTGGTAAA TGGTTACGTA GTACTGCTGA TAATTGGATA CGTAATTGGG
TTAATTGGCG TGGCAATAAC TAGGGATAAT ACTGGAATCG AATTAGATAA GGTTAAGGAA
AGCCTTAGGG AATGA
 
Protein sequence
MLLNSRKLIN YLKLSLSVIL GKTLIFTHLL FYMSSELKVS EINVRALLGG TIGWMVDVFD 
LTLILFIASI IGGAFFPKTN PTAQLLYVFA SYSLTLLARP LGGIVFGHVA DRVGRRITML
ITLIGLGVFS ALTGALPTYA QVGLIATALF VTLRLIVGIF VGGEVSGSHL IAVESSSPRF
RGLVSGVIES GYYWGYALAA LTFALLRDYF GTSNFVAFGW RYAFLVGLVV ALIGVILRLT
VDDPEIYKRA KATGNIAKIP IAELFKASTR DALVALLLLA GIFWVAYATL GFLPTYLTSF
MKLPLNEAFW GLAYASLIGG VLTIAGGVLS NYTGRRRAFL VLIVVGIVLA YPLTIALKLG
YTSLIISAGV LTSVIGTGGV MLAYLAELFP TRFRGSAVGF LWNMASIGAT GALLTSQYWL
KTFGVVNGYV VLLIIGYVIG LIGVAITRDN TGIELDKVKE SLRE