Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0849 |
Symbol | |
ID | 5709537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 893585 |
End bp | 894979 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275352 |
Product | major facilitator transporter |
Protein accession | YP_001540674 |
Protein GI | 159041422 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTTGA ATTCACGTAA ATTAATCAAT TACCTTAAAC TATCATTAAG TGTAATATTG GGTAAAACTT TAATATTTAC ACACCTCCTA TTTTATATGA GTAGTGAGCT TAAGGTAAGT GAGATAAACG TTAGGGCGTT GTTAGGTGGT ACAATAGGTT GGATGGTTGA TGTATTTGAT TTAACACTCA TACTCTTCAT AGCCTCAATA ATTGGGGGAG CCTTCTTCCC TAAAACTAAC CCCACTGCTC AATTACTCTA CGTATTCGCC TCATACTCCT TAACCCTCCT AGCCAGACCA CTGGGTGGTA TTGTGTTCGG CCATGTTGCG GATAGGGTTG GTAGGAGGAT TACAATGTTA ATAACCCTAA TCGGCCTCGG TGTATTCTCA GCATTAACGG GGGCATTACC GACGTATGCC CAAGTGGGCT TAATCGCAAC TGCCTTATTC GTAACCCTTA GGCTAATTGT TGGAATATTC GTTGGTGGTG AGGTCTCAGG CTCACACTTA ATAGCGGTGG AGAGTTCATC ACCCCGGTTT AGGGGATTGG TTAGTGGTGT TATTGAAAGC GGCTACTACT GGGGTTACGC GTTAGCGGCA TTAACATTCG CACTGCTTAG GGACTACTTT GGAACAAGTA ATTTCGTGGC CTTCGGCTGG AGGTACGCCT TCCTAGTAGG TCTCGTGGTT GCTCTCATTG GGGTTATCCT TAGGTTGACT GTTGATGACC CTGAAATCTA TAAGAGGGCT AAGGCAACAG GCAATATAGC GAAGATACCC ATAGCTGAGT TATTTAAAGC CAGTACCAGG GATGCCTTAG TGGCCCTACT CCTATTAGCT GGAATCTTCT GGGTGGCGTA CGCGACGCTG GGCTTCCTAC CAACATACCT CACAAGTTTC ATGAAGCTAC CACTTAATGA AGCGTTCTGG GGGTTAGCGT ATGCATCCTT AATAGGTGGT GTATTAACCA TAGCCGGTGG TGTGTTAAGC AATTACACTG GGAGGAGGAG GGCCTTCCTA GTACTCATAG TGGTAGGCAT AGTGTTAGCG TATCCATTAA CCATTGCGCT TAAACTAGGC TACACCTCAC TCATAATCTC AGCCGGTGTA TTAACAAGCG TAATAGGTAC TGGTGGTGTT ATGCTGGCTT ACTTGGCTGA ATTATTCCCA ACAAGATTCA GGGGAAGTGC CGTTGGCTTC CTATGGAATA TGGCTAGTAT TGGAGCCACT GGGGCCTTAT TAACCTCCCA GTACTGGTTA AAGACCTTCG GTGTGGTAAA TGGTTACGTA GTACTGCTGA TAATTGGATA CGTAATTGGG TTAATTGGCG TGGCAATAAC TAGGGATAAT ACTGGAATCG AATTAGATAA GGTTAAGGAA AGCCTTAGGG AATGA
|
Protein sequence | MLLNSRKLIN YLKLSLSVIL GKTLIFTHLL FYMSSELKVS EINVRALLGG TIGWMVDVFD LTLILFIASI IGGAFFPKTN PTAQLLYVFA SYSLTLLARP LGGIVFGHVA DRVGRRITML ITLIGLGVFS ALTGALPTYA QVGLIATALF VTLRLIVGIF VGGEVSGSHL IAVESSSPRF RGLVSGVIES GYYWGYALAA LTFALLRDYF GTSNFVAFGW RYAFLVGLVV ALIGVILRLT VDDPEIYKRA KATGNIAKIP IAELFKASTR DALVALLLLA GIFWVAYATL GFLPTYLTSF MKLPLNEAFW GLAYASLIGG VLTIAGGVLS NYTGRRRAFL VLIVVGIVLA YPLTIALKLG YTSLIISAGV LTSVIGTGGV MLAYLAELFP TRFRGSAVGF LWNMASIGAT GALLTSQYWL KTFGVVNGYV VLLIIGYVIG LIGVAITRDN TGIELDKVKE SLRE
|
| |