| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0779 |
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| Symbol | |
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| ID | 5708535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 814248 |
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| End bp | 814967 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641275282 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001540604 |
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| Protein GI | 159041352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTACT TACTCGATTT CGGAAAAATG AGCTTTAAGT ACATTGAGTT TGATTATGTC
CACGAAACTG ATTGGACAGC TAAAGCCACA TTTGATGGTT ACGAGTATAA TGTAGTGGAG
TCCTATGTTG ATGGATTAAA GAACCATGTC TACGAGTTTG CAGTACTTAA GGTTAAGGAT
AAGCTAAGTC TAAGGAAATT ATTCAACATA CTTAGCAATG ACCCAAGCGT TGATGAATTA
GTTAAATTTA AACCAATGAA TAAGGGTTAC CCAAAGAGAA TTGGGATCGT TATTAAATCT
AGGTTAAGTA ACTCAACTAG GTATAAGGCT AGGTTATTTG ATGGCATTGA GGTTAAGGAT
TATATAACAA ATGGTGTTGA GAATTGGGGA TTCCTATTCC CAGTTAATGT TAACTTAGAT
CTACTTTTCA ATGGTCTTAA GATTAATGGA AAAATAATTA ATGTACGCTC AAGGAACGTT
AACATAAATG ACGTATTAAG TTTAGTCATC TCCAATAAGA TAACCTCAGT ATTAACTAAG
GCTGAATTAG ACACGTTATA TAAGGTTTAC AAGTTAGGCT TCTTCAATGA ACCAAGGGAA
GCCAGCCTAA GAACATTAGC TAAGGAACTT GACCTATCAA CAAGCACCAT TAGTCACCAA
CTAAGGAGCA GCATAAGAAA AATACTTAAC GCAATATTCA GTAATAATGA ATATATTTAA
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| Protein sequence | MDYLLDFGKM SFKYIEFDYV HETDWTAKAT FDGYEYNVVE SYVDGLKNHV YEFAVLKVKD
KLSLRKLFNI LSNDPSVDEL VKFKPMNKGY PKRIGIVIKS RLSNSTRYKA RLFDGIEVKD
YITNGVENWG FLFPVNVNLD LLFNGLKING KIINVRSRNV NINDVLSLVI SNKITSVLTK
AELDTLYKVY KLGFFNEPRE ASLRTLAKEL DLSTSTISHQ LRSSIRKILN AIFSNNEYI
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