| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0778 |
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| Symbol | |
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| ID | 5708534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 811832 |
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| End bp | 814168 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275281 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540603 |
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| Protein GI | 159041351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTG TTAGGGTACT CGGAATACTA CTATCAATAC TATCGATAGC GGTAGTGTTA
TCGGCAGCCA CTACAGTGAC TTCAGCGGTC AGTTTTAATG TAACCCAAGC CGTATCATCA
ACCCTCTTAT ATGTACCAAA TTCCCCAAGC GACTGGAATT TATTTGTCTC ACACCCAATA
GCCCAAGACC AAGGCGCCTA TGATACATAC TCCCCCTTAG CCTATTATAA CCCAGTTACT
GGTCAATTCT ACCCAGCCCT AGCATATAAT TGGACTATTC AAGTTCTCCC CAATGGTAGT
GGTATTTTAA CTGTTTACCT TAGGCCTGGC TTATACTGGT TTAATGGTAC GGCAACAATA
CCCTTCACTG CATGGGATGT TTACGCAGAG TTCTATATTT ACGTTAAGGG CTTTGGTGCA
TTCTACCCAT TCATGCAGTT CCAGTACGCT GATGAGGATA TTAGGGTAAT TAACAATTAC
ACAATACAAT TCCTATTCCA GGAATGGAGC CCAACAGATT GGATATACTT ACTCACATAC
CACATGTTCA CACCATGGCC TGTTTGGAAG TGGGCAGTGG AGGCATTAAA GAATATTACA
AGCCAATCTG AAGCCCTTGC CTTTGCGCAT AGTAATATTA CTAAGTTCGT TGCACCATAT
TGGGCCCTTA ACCCATACTA CGTATCTAAG GTTGGATCAA ACTTCATAAT AATAACCCTA
GAGCCTCAGA ATTTATTCAA TAGTTGGCTT GAGATTTACC CGTTAAATTC ATTTACATAT
TACCCAACCG TGACCTCACT ATTTGTGGGT GGTAATACCC AATCCATGAC CGATATTTTG
TCTGGCACCG CGCAATTCAT ATACGTCTTC CTGTCTCCAC AGCAGAATGC TGAGCTTGAA
AGCCATGGTA TAAAAGTATT CACAATATAT TCATACGATA TATACGGCAT AACCATTAAT
CCGAATCAAT ACCCATGGAA TATTCCCGCG GTTAGGAGAG TATTATATTA CGTGCTTAAT
ACCACGGCCA TAGCGGCATC ATGGGGATTG CAATCACTCC TACCAGCCAA TTACAATATT
CCAGCTGCGC CATACACATT GGTGACCTTC CCATCATCAA TAACTAACAT GCTATTCACG
TATCAGTACA ATTGGACTAA GGCTGCTGAA ATACTTCAAA GCCTAGGCTT CTACGAGAAG
AATGGACAAT GGTATACACC TAATGGGACA CCATTGCAAT TGCAACTACT AATGCCAGCA
GGCTTCACAA ACCAAGTGGT TCCAGCTACG TATGCTGCAG AGGAATTAAC GGCCTTTGGC
ATCAAGGTTA CCCCAGTATC CGTTGAGCAC GGTACATTAG TCAGTGTATA TATGAAAAAT
GGTCAATTCC AGGCACTTCA ATACTTCGCC CCTAAGGTTG TTAGCTATAT TACTGCATGG
ACCAATTGGC CGCATTCCTC AGTGTGGTAT GATTACGTTG GGAATGTCTT CAACACTTCG
CTTGCCTGGC CCTTCGCTTG GCCTAAGGTT ATTGATCATC AGCTTGTTGG TTGGTATTGT
CAACCATTAT CAACAAACCT ACCACCACCA ATAAATAATA CCCTTGTTTG GTGCGTTAAC
TCAACATTCG GATACATTAA CCTAAGCAAC GTTCAAATAG TGATAGCGGC TGCAGCTCCT
GGTAGTGTTG ATTATGAGAA AGCCATTGAG GCTTGGGTTG CATGGTGGGA GTACTATGAT
CCACAGTTTG TCTGGGGTGC CAAGCTTGAG CCTATTCAAT ATAATCCAAG TTACTTTGAC
TTCACTTGGG CCTACGCATG CTTACCGGGC ATAATAGCTG ACCTAGTGGT TTACCCATCG
GCACAGCAGT CAATACTCGG TATGTATTCA ACATGGTTAC CTGACCCATT CTTCTTCGGT
GGAGTGGCAC CACCAGGCGT TATACCGCCC ATTGCCCAAG CTATTATTAA TGGTTCATTG
TGGACTAAGT ATTCTCAGTA TGCTGAATTC CTTGGCCTAA CACCACAATT CGGCATTAAT
ATTCAGCAGT TGCAGGCTTG TGTTGCATCG TACTTCCATG TGCCTTACAC ACCGGTGACT
ACTTCAACGA CTACTAGTAC TGCCACTTCA ACTACAACTG TTACTTCTGT GGCAACAGTC
ACTAGCACAG TAACCACTAC TGCTGTTAGC ACTGTGACTA GTACAGCAAC AACCACGGCA
GTATCAACAG TAACCGTGAC TAAACCAGTG GTAAGCACAG CATTAATAGC AGGAATAGTA
ATCATAGTAG TGGTTATCGC AGCAATAGCA GCAATAATAG CATTAAGAAG AAGATGA
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| Protein sequence | MATVRVLGIL LSILSIAVVL SAATTVTSAV SFNVTQAVSS TLLYVPNSPS DWNLFVSHPI
AQDQGAYDTY SPLAYYNPVT GQFYPALAYN WTIQVLPNGS GILTVYLRPG LYWFNGTATI
PFTAWDVYAE FYIYVKGFGA FYPFMQFQYA DEDIRVINNY TIQFLFQEWS PTDWIYLLTY
HMFTPWPVWK WAVEALKNIT SQSEALAFAH SNITKFVAPY WALNPYYVSK VGSNFIIITL
EPQNLFNSWL EIYPLNSFTY YPTVTSLFVG GNTQSMTDIL SGTAQFIYVF LSPQQNAELE
SHGIKVFTIY SYDIYGITIN PNQYPWNIPA VRRVLYYVLN TTAIAASWGL QSLLPANYNI
PAAPYTLVTF PSSITNMLFT YQYNWTKAAE ILQSLGFYEK NGQWYTPNGT PLQLQLLMPA
GFTNQVVPAT YAAEELTAFG IKVTPVSVEH GTLVSVYMKN GQFQALQYFA PKVVSYITAW
TNWPHSSVWY DYVGNVFNTS LAWPFAWPKV IDHQLVGWYC QPLSTNLPPP INNTLVWCVN
STFGYINLSN VQIVIAAAAP GSVDYEKAIE AWVAWWEYYD PQFVWGAKLE PIQYNPSYFD
FTWAYACLPG IIADLVVYPS AQQSILGMYS TWLPDPFFFG GVAPPGVIPP IAQAIINGSL
WTKYSQYAEF LGLTPQFGIN IQQLQACVAS YFHVPYTPVT TSTTTSTATS TTTVTSVATV
TSTVTTTAVS TVTSTATTTA VSTVTVTKPV VSTALIAGIV IIVVVIAAIA AIIALRRR
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