Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0736 |
Symbol | |
ID | 5708513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 768223 |
End bp | 769419 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275238 |
Product | major facilitator transporter |
Protein accession | YP_001540562 |
Protein GI | 159041310 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00989309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATAGGA ATGTTAAGGC TCTTGTGGCT TCAAGGATTA TTAGAAGCTT CTCCTTCGGG TACTTATCAT TCATAATACC TCTTTACCTG AAGTCCATAG GCTTCAACCC AGTGTTAATA GGGTTATACT TCATGATTAA TGCAATCTCC TCATCACTAC TAGTATTGGC GGCTGGTTTC CTAGGGGATC TTTATGGTAG GAGGGATACA CTCATAGCTA TGTCATCCTT ATTCACAGCA TCAATGCTGG TTTATAGTAC TACGGTAAAT AGGTTAGCGA TATTCGCAAC CTCAATACTA GGCACCACAG GGGGTGGTGG CCCTGGGGGA GGCGCTGGTG GTGGCCCAGT TACACCGCTT CAAACCTCAT TACTAGCTGA TAATACGAGT CCAGTTGAAA GAACTAGGGT TTATAGCATA ACCACTGCCG CATCAACTGC ATCATCACTG GCTGGTGCAG CGTCATCATA CCTATTCCTC AGTATGGGTT TAGGGGACTT ATTCCTATTT AGGTTATCCG CGGTGCTTAG TGCATTATCC CTACTGGTCT TATTAATGGT GAGTAGGGAT AAGGGGAGGA TTAGGGTTGA TTCAATAAGT CAAATAATCC CAAGAAGATC AAGTGGCTCA GTGGTTAAGA TTGCGATTGC CGGTTCCTTG GGTAGCCTTG GATTAGGTAT GGTTACTCCG CTTCTTCCAC TCTGGTTTAA GCTTTACCTG CACGCCACTG AGCTTGACGT AAACATGATT TACATGGCAT CATACTTAGT TTCAATGGTT TCCACACTGC TGGCTGATAG GGTGGAGAGA GTGATGGGTA GGGTTAAGGC TATATCAGTG CTTAGGGCTG TTTCAGTGGG CTTATTCATA GTAATGGCGG TAACACCCAG TTTAATAATA GATTCGGTAC TTTACATAAT TAGGGTGGCG CTTTACATGG TTACCATACC CATGAGGCAG TCCTTATCCA TGGAGGTTAT AACCAGTGAT GAGAGGGCTA GGGGATTATC CATAACCGGC TTAGCCAGGA GGCTACCCTA TAGTTTAGGT AGTTTCATAG CTGGTGTAAT GATGAATTCA GCATTATTCG CATTATCAAT GATAACCGGA GGCTTAGTAT CAATGCTTGA TCCACTGCTT TACTACATAT TCTTTAGGTC ACTTGGAGTG AGGAGTAGGG ATCGTGTTAA TGATTAA
|
Protein sequence | MNRNVKALVA SRIIRSFSFG YLSFIIPLYL KSIGFNPVLI GLYFMINAIS SSLLVLAAGF LGDLYGRRDT LIAMSSLFTA SMLVYSTTVN RLAIFATSIL GTTGGGGPGG GAGGGPVTPL QTSLLADNTS PVERTRVYSI TTAASTASSL AGAASSYLFL SMGLGDLFLF RLSAVLSALS LLVLLMVSRD KGRIRVDSIS QIIPRRSSGS VVKIAIAGSL GSLGLGMVTP LLPLWFKLYL HATELDVNMI YMASYLVSMV STLLADRVER VMGRVKAISV LRAVSVGLFI VMAVTPSLII DSVLYIIRVA LYMVTIPMRQ SLSMEVITSD ERARGLSITG LARRLPYSLG SFIAGVMMNS ALFALSMITG GLVSMLDPLL YYIFFRSLGV RSRDRVND
|
| |