Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0658 |
Symbol | hisS |
ID | 5709571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 694033 |
End bp | 695316 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275159 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001540488 |
Protein GI | 159041236 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.269942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAT CTAAGAGGCA TGTGGAGGAT TGGTTGCTTC AACCACCAAG GGGTATGAAT GATTGGACAC CGGATAAGTA TTACTCACTA ATCACTGTAG CCTCTAAGTT ATCCAGGGTT GCTGAGTCCT TCGGATACAG CGCCATTGAG ACCCCTGCCC TCGAGCACTT TGAGGTTTTG AAGGCTAAGG CGGGTGAGGA GGTGATTAAC GAGATATATT ACCTTAAGGA TAAGGCAGGT AGGGAATTAG GCCTCAGATT CGACATGACT GTGCCCGTGG CTAGGGTCCT ATCATATAGG CGTGACTTCC CAAGGCCCAT TAGACTATAC TATGTCTCAA AGGTTTGGAG GTATGATGAA CCACAGTTCG GTAGGTTTAG GGAGTTTTAC CAATTTGGGG TTGAGCACGT AGGCTCACCC ACTGTTCAAT CCGATGCGGA GGTGCTGGCC TTAGCGGTGA AGTCCCTTGA GTCAGTTAAC TTACCTCAAT TAACTGTGAA GGTTAGTGAT AGGAGGATCA TGGATCAACT ACTGGATAAG ATGAGTATTA GTACTGCTAG GGAATCAGTG TTAAGGATAC TTGACAAGAG GGGTAAGGTT ACTGATGACG AGTTAATTAA GCTACTTATT AGGGAGGGTA TTGATAAGAC TAAGGCAGAG TCCCTAGTGG CAATAGCCAG CACCAGGACT CCGATAGTTA ACTCGACGGG TGAATTAAGG GAATTAGGTG TGGGTGATGA TTTAATTAAC TATGTTGAAT CCCTCGTCAA CGCCTTAACG GATTATGGTG TGTTGGATAG GGTTTACCTG GATTTAAGCA TAGTGAGAGG ATTAGACTAC TACACGGGCT TCGTCTTCGA ACTCTACACC GATAAGATTA AGCTAGCCGT GGGGGGTGGT GGGAGGTATG ATGAGTTACT TAAGGTTTAT TCAGGGGAGG ATGTGCCAGC CGTTGGATTC GCCATAGGTA TTGAGAGGGT GATGCTGGCT CTAAGTGAGG AACAGGGTGG TGTTCCCCCA GTGGATTACT ACGTGTACCC CATGGAGAGT AGTTACTACG GCATGGGTGT TAGGATTGCT GAGAAGTTGA GGGAAATTGG GTTAAGGGTT ATTGTTGACG TGGGTAAACC AAGCCTAAGG TCAGCCCTGG AGTACGCCGC TAGGATTAAG GCGAGGAAGT TCATAATAAT TGGCCGGAGG GAGGTTGAGA AGGGTGTTGT TAGGGTTAGG GATCTTGAGA CCTGGAGTGA GGAGGACGTG CCCTTAGATA AGATCCTTAA GTAA
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Protein sequence | MRASKRHVED WLLQPPRGMN DWTPDKYYSL ITVASKLSRV AESFGYSAIE TPALEHFEVL KAKAGEEVIN EIYYLKDKAG RELGLRFDMT VPVARVLSYR RDFPRPIRLY YVSKVWRYDE PQFGRFREFY QFGVEHVGSP TVQSDAEVLA LAVKSLESVN LPQLTVKVSD RRIMDQLLDK MSISTARESV LRILDKRGKV TDDELIKLLI REGIDKTKAE SLVAIASTRT PIVNSTGELR ELGVGDDLIN YVESLVNALT DYGVLDRVYL DLSIVRGLDY YTGFVFELYT DKIKLAVGGG GRYDELLKVY SGEDVPAVGF AIGIERVMLA LSEEQGGVPP VDYYVYPMES SYYGMGVRIA EKLREIGLRV IVDVGKPSLR SALEYAARIK ARKFIIIGRR EVEKGVVRVR DLETWSEEDV PLDKILK
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