Gene Cmaq_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0637 
Symbol 
ID5710407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp672166 
End bp673188 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID641275138 
Productpolyprenyl synthetase 
Protein accessionYP_001540467 
Protein GI159041215 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATG TTTTAAGTGA ACTACATGAG AAGTATGGGG AATTGGTTAA TAAGGCTATT 
GAGAGGTACT TAACCATAGG TGTTGATCCA TCATTCAGGG AGACTGTACT TTACCAAGTG
GCTACGGGTG GTAAGAGGAT TAGGCCACTA ATGGTTATTG AATCAGCCTT AGCCTGTGGT
GGTTCCCTTG AATCAGCCTT ACCCTACGCC GCCATAGTTG AGTTAATACA TAATTACTCC
CTCATATACG ATGACATAAT TGATGAGGCG GACTTAAGGA GGAATATGCC AACAGTGAGG
AGGAAGTACG GTGACTACGC GGCAATACTG GTGGGGATAT GGTATAGGGA GGCTATTGAG
GAGGCGGTAC TGGATACAAG GAATCCCAGT GAGGTAGCTA GGGTTGTTGC TGAGACTATA
AAGGCCATTG ATGAGGGTGA GAGACTTGAC ATACTGATGG AGTACTCGGG TAGAAGGGAT
CCTTACTTTA TTGAGAATAG ACTTGTTAGG GAAATAACCC CAGCCTTAAG GGACCTTTAC
ATAAGAATGA TTTCACTTAA GACTGCTGCA TTATTTAAAA CATCAATGTG GCTCGGCGGC
TACTCGGCGA AATGCGGTAA CGAGCAATTG GAGGCGCTGA GTAATTTCGG GTATAACGTG
GGTGTGGCCT TCCAAATAAT AGACGATGTA CTAGACATAT TCGGTGACTT AAGGAAGTTC
GGTAAGGAGA TTGGTAAGGA CCTTAAGGAA CATAAGGTCG GTAACCTAGT TATACTGCTT
TCACTCCTTG AGAGTAAGGA GGCTAATAAG CTACTTAATG TGCTTTCCAA GCAGAGGCCG
ACTCAAGACG ATGTTAAGGA GGCTGTGGAG GTTATTTCAG CAACTAAGGC TAGGGAGGAG
GCTATTAGGA TGGCTAATGA ATACATGAGT AAGGCCATTA GTGAACTAAG TAAGGTGCCT
AGGAATGAAC ATACAATGAA GCTGGAGGAA CTGGCTAAAT TCATAGTTTA TAGGGAGTAT
TGA
 
Protein sequence
MVDVLSELHE KYGELVNKAI ERYLTIGVDP SFRETVLYQV ATGGKRIRPL MVIESALACG 
GSLESALPYA AIVELIHNYS LIYDDIIDEA DLRRNMPTVR RKYGDYAAIL VGIWYREAIE
EAVLDTRNPS EVARVVAETI KAIDEGERLD ILMEYSGRRD PYFIENRLVR EITPALRDLY
IRMISLKTAA LFKTSMWLGG YSAKCGNEQL EALSNFGYNV GVAFQIIDDV LDIFGDLRKF
GKEIGKDLKE HKVGNLVILL SLLESKEANK LLNVLSKQRP TQDDVKEAVE VISATKAREE
AIRMANEYMS KAISELSKVP RNEHTMKLEE LAKFIVYREY