| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0600 |
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| Symbol | |
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| ID | 5710401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 629291 |
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| End bp | 631663 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275101 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540431 |
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| Protein GI | 159041179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAC TAAGTATCTC TAGACATATA TGGTTAATAC TAGGTGCAAT AGTAGTTATG
TCAATAAGTA TAGCTAGTGC TCAGTCATCA TACCCCACGT ACACCCTTTA CTATGCAGCA
CCATGGTACT ACGTTGTTGT CCCCCCATGG CCTGCCCCAT GGTATAACCC ATTCTCATCC
CTAAGCCTTT GGCCAATATG GTGGGCCAGT GATTATGCGC CATTAGCATT ATGGAACCCG
ACTACTAATG AGTTTTGGCC TGTTTTAGCC AGTAATTGGA CTGTGTTTCC TCAGAATAAG
ACCTTGATAA TCTACCTTAG GCATAACTTA TATTGGTTTA ATGGTTCAGC CACAATACCC
TTCACCGCAT GGGATGTTTA CGCATACTTC TACATTGAGG CGAAAGCCTT TAATGCATAT
TCACCTTGGA TTAGTCCTCA GAATGCTGAT AAGGACATAA TAGTGCTTAA TAATTACACC
ATTGAATTCC ACTTCGATGT ATGGTCACCC ACAGAGTGGA TATTCATACT TATAACCAGG
CCTGAAACAC CATGGCCAGT CTGGGAGAAC GTAGTAAACG AGTTAAAAAC AATGAATGCC
AGTGAAGCCT ACACCTTTGG GCAGAAGAAT ATAACTGAAA TGGTTGTACC ATACTGGAGC
CTAGGCCCAT ACTATGCTAG TCACGTTAGT CCACAGACAA TTACTGTTCA ACTAGTGCCC
CAGCAGTTGT TGACTGAGTG GGGTAGCGTG TTTCCATTCC ACACATGGCA ATACTACCCA
GAGTTAAATG CCTATATTTC ACTCTCCTCA GGAACAACTC AATTACTTGA ATTAATGGCT
ACCCATAGTA ACTTCTTCGT ACTTGGGTGG ACTGCACCAC CTTCAACATA TCAGGTCGCC
ATTAAGGATG GTTACGTATT TAACCCAATG CCAGATATCT CAACCATGGG ATTCTCAATA
CCGGCATACT ACCCATTTAA TATTCCTGCT GTCAGACAAG CATTTGCATA CATTATCAAT
AGGACTGAGG CAACCCTAGC ATGGGGACCG CCACCATACG CCTACTATCC AGTATGGATA
CTTGCACCAG CCCCAGCTCC TAATGTTGTC CCTGGTCTAT GGTCAACAAT ACCCGAAGGC
ATTAGGAGCA TGGTTATTAA TTATACTGTT AATTGGTCTT ACGCCTCTCA GTTACTTGAA
TCAGCTGGCT TAACCTATAA GAGCGGCCAA TGGTACCTAC CCAACGGAAC ACCACTAACA
CTAACACTAT ACACCGACGG GCGTACTGAC TGGTTAACCA TAAGTTCTGA AATAGCTGCA
CAATTAGGGA AGTTTGGAAT ACCAACTAAG GTCATTTCTG TTGAGGCTGC AACATATTCC
ACTGAGGAGA CTACGTGTAA ATTACCTGAT AATGTTGATT TCATATATGC AGGCCTTAAT
AAGGGTGGTT ATGATACATT CTGGGTTTCC TTAACTTCAG CTCAATGGAA TGGCCCTGCA
TTATTCCCAG CAGCATGGTG TATTAACGGC ACCACTACGC CTTTCGCCTA CCCGATTGTT
CAGAGTAATC AGATTACCGG CTGGTATTGT AAACCATTAA CCACCAACCT ACCTATACCG
AATAATACAA TTATCTGGTG CATTAACTCA ACCTATGGTC TCATAAACCT AACCAATTGG
GAGGATGCCA TAACGGCTGC TGAGCCTGGT TCATCAACAT ACTATGAGTT AATTAAGGCA
TTCTACGCAT GGTCCGAGTA CTGGGTACCA GCAATTCAAA TAGGTACTGA GGCGATAGCT
CAGGGTGCTG TACCTAAGTA TGTTAATATG GGGTGGTTAA TGAAGTGCAT ACCGTTTAAT
GCATCTAAGT ACAGCGAAGC AGCATACACG TTAGAGTATC CTCATGGAAT GTCAGGAGCA
TCCTTCGATA CAATAGACTT AGTATTCCTA GGTGGATTCG CACCTCAAGG CGTGATGCCT
CCTCTAGCTC AAGCTATTGT TAATGGTTCA TTATGGACTA AGTATCCTCA GTATGCGGCA
TTCATTGGTT TACCTAATCC TGATCCTCAG TTGCAGGCTT GTGTAGCATC GTACTTCCAT
GTACCGTATA CTCCAGTTAC TTCAACTACA ACGACTTCAA CGACTACGGC CACAACAACC
TCAACAACCA CTGTTACTTC AACTGCCGTT GCTACTGTGA CTAGTACTGC CACTGTAACA
TCAACAAGCA CAGTAGTAAG CACAACAACC ACTACGGCAG TAAGCACAGT AACAGTCACA
AAACCAGTAA TAAGCACAAC ACTAGTAATA GGAATAGTAA TCATAGTAAT AGTCATAGCC
ATAGTAGCAG CAGTACTAGC ATTAAGAAGA TGA
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| Protein sequence | MGKLSISRHI WLILGAIVVM SISIASAQSS YPTYTLYYAA PWYYVVVPPW PAPWYNPFSS
LSLWPIWWAS DYAPLALWNP TTNEFWPVLA SNWTVFPQNK TLIIYLRHNL YWFNGSATIP
FTAWDVYAYF YIEAKAFNAY SPWISPQNAD KDIIVLNNYT IEFHFDVWSP TEWIFILITR
PETPWPVWEN VVNELKTMNA SEAYTFGQKN ITEMVVPYWS LGPYYASHVS PQTITVQLVP
QQLLTEWGSV FPFHTWQYYP ELNAYISLSS GTTQLLELMA THSNFFVLGW TAPPSTYQVA
IKDGYVFNPM PDISTMGFSI PAYYPFNIPA VRQAFAYIIN RTEATLAWGP PPYAYYPVWI
LAPAPAPNVV PGLWSTIPEG IRSMVINYTV NWSYASQLLE SAGLTYKSGQ WYLPNGTPLT
LTLYTDGRTD WLTISSEIAA QLGKFGIPTK VISVEAATYS TEETTCKLPD NVDFIYAGLN
KGGYDTFWVS LTSAQWNGPA LFPAAWCING TTTPFAYPIV QSNQITGWYC KPLTTNLPIP
NNTIIWCINS TYGLINLTNW EDAITAAEPG SSTYYELIKA FYAWSEYWVP AIQIGTEAIA
QGAVPKYVNM GWLMKCIPFN ASKYSEAAYT LEYPHGMSGA SFDTIDLVFL GGFAPQGVMP
PLAQAIVNGS LWTKYPQYAA FIGLPNPDPQ LQACVASYFH VPYTPVTSTT TTSTTTATTT
STTTVTSTAV ATVTSTATVT STSTVVSTTT TTAVSTVTVT KPVISTTLVI GIVIIVIVIA
IVAAVLALRR
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