| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0509 |
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| Symbol | |
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| ID | 5709672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 545346 |
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| End bp | 545906 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275013 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001540344 |
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| Protein GI | 159041092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1096] Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.275397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGGGT CTTCAGTAAG TAAAGCCTTA GTCACACCTG GTGAGGAATT GGGTGTTGAG
GAGGAGTATC TTCCAGGCGA TAATGCGTAC GTTGATTCAG GCTACGTTAA ATCAATGGTT
CTTGGCATTG CTGAGTGGGA TAGAGTTAAC CACGTGGTTA ACGTTAAGCC ACTTAAATTA
AGCCTAATTA GGCCTGGGCA AATAGTGTAC GGTAAGGTGT ACTACTTCCC AAACGATAAG
GTCGCCATGG TTAGGATCTT CGCTGTTCAA CATCAGGATG GGGTTAGGAG GATTCAAGCT
GAGACGGGTA TACTTTACGT AACTTATGCC TCCGAGGAGA GGTTAAGCAC TATTTATGAT
GCGGTGGGTT TAGGGGACTT AATTAAGGCG AGGGTTTTAT CAAGTAAGCC ACCATACCAC
ATAAGCCTAA GGGGCCCATT ACTCGGTGTT GTTGAAACTA GGTGTCCTCA ATGCAGGGCA
GTGATAGTAC CATCAACATC AAGTAAAATA ACGTGCCCAG TCTGCGGCTT TGTCTTTAGG
AGGAAAGTGG CGGCATCATG A
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| Protein sequence | MQGSSVSKAL VTPGEELGVE EEYLPGDNAY VDSGYVKSMV LGIAEWDRVN HVVNVKPLKL
SLIRPGQIVY GKVYYFPNDK VAMVRIFAVQ HQDGVRRIQA ETGILYVTYA SEERLSTIYD
AVGLGDLIKA RVLSSKPPYH ISLRGPLLGV VETRCPQCRA VIVPSTSSKI TCPVCGFVFR
RKVAAS
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