| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0502 |
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| Symbol | rps13p |
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| ID | 5709086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 538707 |
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| End bp | 539195 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641275006 |
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| Product | 30S ribosomal protein S13P |
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| Protein accession | YP_001540337 |
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| Protein GI | 159041085 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.712073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAGG CTAGTCAAGG TAGGCAAATA GTGCATATTG GGGATACTGA CCTAGATGGC
TCTAAGGCCG TTGCCTACGC GTTAGCTAGG ATTAAGGGTA TTGGGGTATC CACTGCAGTA
GCCATATGCA GGAACCTGGG TATTAATCCA TTGGTTAAGT TGGGGGAATT GAATGAGGAG
ATGATTAGGA AAATAGATTG GGCGGTTAGG AACCTCCACC AAGCAGCCCC AGCCTGGTTC
GTTAATAGGC CTAAGGATCC TGAAACAGGA AGAAACATAC ACCTAATAGG AGCTGACTTA
ATATTAACGG CTAGGAATGA TATAGAGAGG GAGAGGCGCA TACTATCCTG GAGGGGAATT
AGGCACAACC TAGGCCTAAA GGTTAGGGGG CAGAGGACTA GGACAACGGG TAGGCTTGGG
CCGGTGGCTG GTGTTCAACG TAGGAGAACG CCCACTGGAG CCGGTGGAGG GGAGGGTGGC
CAAGGTTAA
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| Protein sequence | MSEASQGRQI VHIGDTDLDG SKAVAYALAR IKGIGVSTAV AICRNLGINP LVKLGELNEE
MIRKIDWAVR NLHQAAPAWF VNRPKDPETG RNIHLIGADL ILTARNDIER ERRILSWRGI
RHNLGLKVRG QRTRTTGRLG PVAGVQRRRT PTGAGGGEGG QG
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