| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0473 |
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| Symbol | |
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| ID | 5710289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 512717 |
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| End bp | 513286 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641274976 |
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| Product | haloacid dehalogenase superfamily protein |
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| Protein accession | YP_001540308 |
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| Protein GI | 159041056 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000815699 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.006759 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGCCTA ATAGGGATTC CATTAAGGCT AAGTTAAGGG AGTATGAGGA CGCCAGGGAT
AAGGTGATTA ACACTGGCAT TAGGTTAAAT AGGTTATCTA AATCAGTAAT ATACTCGGTT
ATTAGGAATG ATTGGGAGGC AGCGGACAAG TACTTAAATG ACATGAGGAG GGAGTTAGAG
TCATTAATGA GCTTAATTAA ACAGTACCCA TTCTACTACG ATAAGGCTGC AGTAAGCTTC
CAGGAGTACG CTGAGGCCTA CATAATGTAT GAGTTCAATA AGAATGGTAA AATACCCACC
ATTGAGGAGG TTGGGGTTGA TGAATTAGCC TACTTAAACG GGTTAATGGA GTTCACGGGT
GAATTATCGA GGAAGGCCAC TGAGGAGTTG ATTAGGGATA ACTTGGACTA CGCCCTTAAG
GCTAAGGAAA CCATGGAGGA TATTTACCTA GACATGCTCT ACATGGAGTT CAGGGACTTC
GAAATGAGGA AGAAAGTCGA CTACGTAGCT AACAACATTA ATTGGTTAAA CGAGAAAATA
TTCTACAAGA CGCTAAACAA GGGGAGGTAA
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| Protein sequence | MLPNRDSIKA KLREYEDARD KVINTGIRLN RLSKSVIYSV IRNDWEAADK YLNDMRRELE
SLMSLIKQYP FYYDKAAVSF QEYAEAYIMY EFNKNGKIPT IEEVGVDELA YLNGLMEFTG
ELSRKATEEL IRDNLDYALK AKETMEDIYL DMLYMEFRDF EMRKKVDYVA NNINWLNEKI
FYKTLNKGR
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