| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0425 |
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| Symbol | |
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| ID | 5709529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 459663 |
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| End bp | 460478 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641274928 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001540260 |
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| Protein GI | 159041008 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGTCA GTAACTTCAT TACAGTACTT AGGAATTGGC TTGATTCATA TTCACGCCAA
GTCAGCGTTA AGAGCGGGTA TACGATATCA TCTGAGTTAA TTAAGGTTAG TATGCTTTAC
CTATTCACCC AGGCAGTTGC ATCACTTGCC TTAGCCATTA TTCTAGTTAA ACTGGGGCCT
AGGATTTCAC TACTCTTTAT CCTGATCTCA GCATTATCAT TAACGGCGAT AGGGATGATT
AACGCCTACA TCGTGATTAT GCTTAGGTCA AGAGCCAGGA AATTCGAGAA GTCGATGACC
ACAATACTGC TAACCATGAT ACCTTTAATG GCCAGTGGGG AACCATTAGT TAACGTATTC
AATTACCTAG CTTTAATTAA AATTGAGCCT GAGGTTAATG AGGAATTCAG GAGACTGGTG
AGCGAGGCTT ACAGCGGCTT CGACATAGTG AGCGCAATTA AGAGGAGTAT TGAAAGGGTT
CCATCCAGGG TGTATAATGA TGTAATGAGC ATACTTGTTG AATCATATGG GGTAAGTGGG
AGTATAGCCG ATGTGCTTGC GCTTAAGTTG GATTCAATAA TAAGGAGGGA GCAGTCGACG
TTTAAGTCAA GGACCCAGGC CTTATCACTA ATGATGGAGG TTTACGTGGT TTCAGCTCAA
TTACTGCCAA TACTACTCAT AATACTAACC ATATCACTGG CCCCATTGGG CTCCGTTCCA
ATAAACCCGG AGGCCCTAAT ACTACTCATG TTCCTAATCT ACGTACCAGC AATTGGCTCA
GTCTTCTATA TAATAATGAG TGGGTTACTG GATTAA
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| Protein sequence | MRVSNFITVL RNWLDSYSRQ VSVKSGYTIS SELIKVSMLY LFTQAVASLA LAIILVKLGP
RISLLFILIS ALSLTAIGMI NAYIVIMLRS RARKFEKSMT TILLTMIPLM ASGEPLVNVF
NYLALIKIEP EVNEEFRRLV SEAYSGFDIV SAIKRSIERV PSRVYNDVMS ILVESYGVSG
SIADVLALKL DSIIRREQST FKSRTQALSL MMEVYVVSAQ LLPILLIILT ISLAPLGSVP
INPEALILLM FLIYVPAIGS VFYIIMSGLL D
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