Gene Cmaq_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0415 
Symbol 
ID5708778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp449830 
End bp450543 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID641274918 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001540250 
Protein GI159040998 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TAAACCACCC CTCAATACTT GTTGAGGCTA AGGGGGTTAG GCTACTTCTT 
GATGCCGGGG AGGGTTCATA TAGGCAGTTA AGGAGGTGTA CTGGCCTTGA TGTTGACTCA
ATAGACGCAG TCATAGTTAC TCATGGGCAT GGTGACCACA TCCTCGGCTT ACCCTCATAC
GTACTAATGG CTGGTTCAAG GGGCATTAGG CTAAGTGTAA TAGCCCCAAG GTACGTTATG
GATGATTTAG TAAGCCTAAT TAAGGCTACA CACATTCAAC AGTACGTGAA TGCGCTTAAC
CCAATACCCG TTGATACGCC GAATGAGCCA TCCTTCATAA TGGAGTTTAA GGGTATTAGG
ATTTACGCTG TTAAGGTTAA CCACACCGTG GAGGCTATGG CTGTTAAGTT AATTGACTCA
GATGGATCAT GCCTAACCTA CAGTGGCGAC ACAGCACCCT CACGGTCACT GGTTGAGTTG
GCTAAGGGCT GTGGTGTACT TATTCATGAG GCGAGCGGGA ATCCAGGCTT TGAGGAGGAG
GCTCATAGGC ATGGCCACAG TACCGTTAGG GACGCCGTTA ATATTGCTAG GGAGGCTGGT
GTTAAGCAGT TAGTGTTAAC CCACTTCTAC ACAGTTAACC CAATCATAAG TGAACTGGGT
GAGGGGTTAA GCCTAATGAT ACCTTACGAA TGCTCAACTA TTGAAGTTAA GTAA
 
Protein sequence
MPWLNHPSIL VEAKGVRLLL DAGEGSYRQL RRCTGLDVDS IDAVIVTHGH GDHILGLPSY 
VLMAGSRGIR LSVIAPRYVM DDLVSLIKAT HIQQYVNALN PIPVDTPNEP SFIMEFKGIR
IYAVKVNHTV EAMAVKLIDS DGSCLTYSGD TAPSRSLVEL AKGCGVLIHE ASGNPGFEEE
AHRHGHSTVR DAVNIAREAG VKQLVLTHFY TVNPIISELG EGLSLMIPYE CSTIEVK