| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0399 |
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| Symbol | |
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| ID | 5710009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 435715 |
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| End bp | 436062 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641274903 |
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| Product | transcription termination factor Tfs |
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| Protein accession | YP_001540235 |
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| Protein GI | 159040983 |
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| COG category | [K] Transcription |
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| COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
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| TIGRFAM ID | [TIGR01384] transcription factor S, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.227419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTAATTT ACATGGCTAT AAAATTCTGC CCTAAATGTG GATCAATAAT GAAACCATAT
AGGAACGGTA ATAAGGTTAC TTGGAGGTGC CCTAAATGCG GGTACGTTGA AGACTCCTCA
ACAACAGTCC CATTGGTTGA GAGGACTGTA ATTGAGCATA AGCCTGATGA GAAGCCGGTG
GTCTTAACTA AGGCTAATGA TAATTTACCC AAGGTTAAGG TAACCTGCCC AAGGTGCGGC
AACAATGAAG CGTACTTCTG GATTCAGCAG ACTAGGGCGG CTGATGAACC ACCAACAAGG
TTTTACAGGT GCACTAGATG TGGGTATACT TGGCGTGAGT ATGAGTAA
|
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| Protein sequence | MLIYMAIKFC PKCGSIMKPY RNGNKVTWRC PKCGYVEDSS TTVPLVERTV IEHKPDEKPV
VLTKANDNLP KVKVTCPRCG NNEAYFWIQQ TRAADEPPTR FYRCTRCGYT WREYE
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