| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0322 |
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| Symbol | |
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| ID | 5709456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 359208 |
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| End bp | 361193 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641274826 |
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| Product | ribosomal protein S12/S23 |
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| Protein accession | YP_001540160 |
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| Protein GI | 159040908 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1372] Intein/homing endonuclease |
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| TIGRFAM ID | [TIGR00982] ribosomal protein S23 (S12)
[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.497912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGTA AAAAGAGCCC ATTAGGACTA TATGCCGCTA GGAAGCTTAG AAGAAAGAGA
CAGAAATTCA GGTGGAGTGA TATTCAGTAT AAGAAGAGAG CGTTAGGCTT TATTAAGAAG
TATGACCCAC TGGAAGGAGC CCCAATGGCA AGAGGAATAG TACTGGAGAA GGTAGGCGTA
GAGGCAAGAA AACCCAACGC AGCAGTGAGG AAGTGCGTAA CCCCAGATAC ATTAATTAAT
TTAACACCCA GGGTAGCAAC TAGGATAATT AACCTCGCGG GTAATTGGCA TGAAGTTTCA
ATAATCCACT TCAATAAGGG TTCTAAGGTA ATTGAACCAA CTAGGCTCAT TGACTTCTTC
CACATAGAGC CCGAGGAGTT TAGAGAGGAT GGTGTGTATG AGTTGAGGAC ACTCTACGGT
AGGAGAATAA TAGCGAGTGG TGATCACCCA ATATACACTG GGAGAGGCAT ATTACCCCTT
AAGGAGGTTA AGCCAGGTGA TTACGTAGCC GTATACCCAA GGGAGCCCAT TGAGGCTTAC
ACGCTTAATG ATGATAGAGT AATACTAACT GAGGATGACA TAAGAAGGGA GGCTCCACCA
AACGCCAAGG TTGATCAAAT TATTAATAGG CTTAAGGAGT TAGGACTGAT ACCACTTAAG
TATAGTAATA GTAATATTTA TAGGATTGCA CGATTAGTCG GCCATCTATT TGGGGATGGG
TCACTAAGCT ACGTTAAGAG TGGCAATGGT TATGAGGGTA AAGTGGCATT CAGTGGAAAT
CCCAGTGACC TTGAGGACAT TATAAATGAT TTAATTGAAT TAGGATTTAA ACCATCAAAG
ATTAGGGAGT ACCACGGCGA AAGCATTGTT ACCTGGAGTA ATGGATTAAT GAATGTAATT
AGCGGTAAGT CAAATGTTGC CTTCGTCACC TCAATAACGT TATTCACGCT ACTTAAGGCA
TTGGGGATTC CCGTTGGTGA TAAGGCACTG CAGGCATATA GAGTGCCTGA GTGGGTAATG
GAGGCTCCAT TGGACGTTAA GGCGGAGTTT TTAGCCGCGT ACTTCGGTAG TGAGTTAGAG
AGACCGCGGG TTGAGAATAA CGGTAGAACA TTCCAACCAC CAACACTGGT AATACACAAG
GCTGAGAACC TGGCTGGGAA TGGTATTGAA TTCCTAAACG ATATTAGGAA ACTACTTAGT
GAATTCGGTA TAGAGACAAC ACCCGTGAGC GTTAGCAGTG GCGTCATTAG GAAGAATGGC
ATTAGGACCG TTAGGTTGAG GTTTTCAATA ATTAGTAACA CTAATAACTT ACTAAGGTTC
TTTGGAAGGA TAGGCTATGC GTACAATAAG GAACATGACT CACTGGCGGT ATTAGCGTAT
GAGTATCTAC GTAGAAAGGT TTTGCTTTGG CAGCATTACG CTGATGCTTA TGAATTAACG
AGGAAATTAA TGAGCGAAGG CTACGACGGA CCCAGTATAG TTAAGGCCCT TAGGAGCGCC
GGGTATAGGG TTAGTAGGGC CACGGTGTAT AAGTGGTTAA AGGGTGTTAA GAATACTAAG
TACATAGGTA GAACAGCCAG AATACCATCA TTCAGTGATT GGATTATTAA GGCCACACTA
GGGCTGGGGA ACTCGGGGCT GGTTTGGGAT GTGGTCACTG AAGTTAAGCC CATTGAGTGG
AATGATAGGC TTTGGGATGT GACCACTGAA AGCTCATACC ATAACTTCAT TGCAAACGGC
CTGGTAACCG GCAACTGTGT CAGGGTCCAG CTTACGAAGA ATGGGAAGGT GGTTACGGCA
TTCGTGCCGT GGGATGGTGG TTTAAACCTC ATTAATGAGC ATGATGAGGT GATCATAGAG
AGGATCGGTG GCCCAGAGGG TAGGGCTTAC GGTGACCTAC CTGGCGTGAG GTTTAAGGTA
ACTAAAGTTA ATGGAGTCAG TCTTAAAGCC ATACTACTGG GTAAGAAACA GAAACCAGTT
AGATAA
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| Protein sequence | MSGKKSPLGL YAARKLRRKR QKFRWSDIQY KKRALGFIKK YDPLEGAPMA RGIVLEKVGV
EARKPNAAVR KCVTPDTLIN LTPRVATRII NLAGNWHEVS IIHFNKGSKV IEPTRLIDFF
HIEPEEFRED GVYELRTLYG RRIIASGDHP IYTGRGILPL KEVKPGDYVA VYPREPIEAY
TLNDDRVILT EDDIRREAPP NAKVDQIINR LKELGLIPLK YSNSNIYRIA RLVGHLFGDG
SLSYVKSGNG YEGKVAFSGN PSDLEDIIND LIELGFKPSK IREYHGESIV TWSNGLMNVI
SGKSNVAFVT SITLFTLLKA LGIPVGDKAL QAYRVPEWVM EAPLDVKAEF LAAYFGSELE
RPRVENNGRT FQPPTLVIHK AENLAGNGIE FLNDIRKLLS EFGIETTPVS VSSGVIRKNG
IRTVRLRFSI ISNTNNLLRF FGRIGYAYNK EHDSLAVLAY EYLRRKVLLW QHYADAYELT
RKLMSEGYDG PSIVKALRSA GYRVSRATVY KWLKGVKNTK YIGRTARIPS FSDWIIKATL
GLGNSGLVWD VVTEVKPIEW NDRLWDVTTE SSYHNFIANG LVTGNCVRVQ LTKNGKVVTA
FVPWDGGLNL INEHDEVIIE RIGGPEGRAY GDLPGVRFKV TKVNGVSLKA ILLGKKQKPV
R
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