Gene Cmaq_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0320 
Symbol 
ID5708744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp358426 
End bp358737 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID641274824 
Productribosomal protein L7Ae/L30e/S12e/Gadd45 
Protein accessionYP_001540158 
Protein GI159040906 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.259957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.994285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGATA TATCAAGGGA ACTGCAAGTT GTAGCTAATA CAGGTAGGTT GACGATGGGT 
GTTAGGCAAT CAATAAAGGC TATACTTAAT GGTGACGCTA AGTTAGTTAT AATGGCCGCT
AACGTACCGC CAAGCATCAG GCAGGATGTT GAAAGATACG CTAAGTTATC TCAAGTACCA
GTATTCACCT ACGCTGGGAC AAGCTGGGAA CTGGGAGGCG CATTAAGGAG GAGTCATAAA
ATAGCAGTTG TGGCTATTAT TGATCCAGGT GAGAGTAGTA TAATGTCCCT TGCCGGTGGT
GCCAATGTCT AA
 
Protein sequence
MIDISRELQV VANTGRLTMG VRQSIKAILN GDAKLVIMAA NVPPSIRQDV ERYAKLSQVP 
VFTYAGTSWE LGGALRRSHK IAVVAIIDPG ESSIMSLAGG ANV