Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0281 |
Symbol | |
ID | 5709638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 319383 |
End bp | 320459 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274785 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_001540119 |
Protein GI | 159040867 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000413141 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTATGT ACTGCATCAT GACACGGTTA ATTAAGGTTG ATGCAGTTAA CCCTGATATG GCTCTCATAA GGATTGCGGC AGATGTAATA CTTAAGGGTG GTTTAGTAGC CTTCCCCACT GAGACTGTTT ACGGGCTTGG TGCATCAACC TATAATGATG ATGCAATTAG GAGGATTTAT GCCGTTAAGA ATAGGCCCAT GGATAATCCA AGCATAGTTC ACATATCATC CTTTAATCAA CTCTATGAAG TAGCTGAGGA TATTCCCAGT GAATTAGAGG AGAGGCTTAA GGTGGCTTGG CCTGGTCCAT TAACGGTTAT TTTAAGGAAG AGTAGTAGAA TTAGTGAAGT CGCCTCCTGT GGATTAAGCA CCGTAGCGGT CAGGATGCCT GCTCATCCAG TGGCCTTAGC TTTAATAAGG GAGAGTACAC CAATATCAGC ACCCAGTGCA AACATATCTG GTAAGCCCAG CCCGACTAGG GCTGAGCATG TTATAAAGGA TCTTTGGGGT AAGATAGACT TAATAATTGA TGGTGGTGAA ACATTCTTCG GCGTGGAGTC AACAATAATA GACTACACCA AGAAGCCCCC AGTCCTCTAT AGGCCTGGTC CATTCACCGT GGAGGAGTTG AGGAGGATTT TCGGGGAAAT CAAAGTACCT GAACAGGCCC TTGGGCTTGG TCAATTCAAG GAGGCCCTTG CCCCAGGCAT GAAGTATAGG CACTATGCCC CGGATAAACC ACTCATTGTA ACTGAGTGCA GTAGCCTAGA TGGCTTAGTT AAGTTGACTC TGGATCTAGC TAGTGATGAG GTTAAGAGAG GGAAGAGGGT TGTGGTGCTT TGTAGTAGTG AAACATGCAG TACTTACGTG AAGGCTGGGT TTAAGGTCAT TGAGGCTGGG TCAAGGGGCA ACTTATACAC TGTGGCTAAG AATCTCTTTC ACTCCCTTAG GTTAATTGAC TCAATGGATG TTGACTTAGC TGTGGCTGAG GGTTACCCTG AGGTTGGGAT TGGGTTAGCA ATCATGAATC GTCTAAGGAA GGCGTCAGGC TACAGCATGG TTAAGTGCAC TACTTAA
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Protein sequence | MLMYCIMTRL IKVDAVNPDM ALIRIAADVI LKGGLVAFPT ETVYGLGAST YNDDAIRRIY AVKNRPMDNP SIVHISSFNQ LYEVAEDIPS ELEERLKVAW PGPLTVILRK SSRISEVASC GLSTVAVRMP AHPVALALIR ESTPISAPSA NISGKPSPTR AEHVIKDLWG KIDLIIDGGE TFFGVESTII DYTKKPPVLY RPGPFTVEEL RRIFGEIKVP EQALGLGQFK EALAPGMKYR HYAPDKPLIV TECSSLDGLV KLTLDLASDE VKRGKRVVVL CSSETCSTYV KAGFKVIEAG SRGNLYTVAK NLFHSLRLID SMDVDLAVAE GYPEVGIGLA IMNRLRKASG YSMVKCTT
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