Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0271 |
Symbol | |
ID | 5708837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 308721 |
End bp | 309566 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641274774 |
Product | hypothetical protein |
Protein accession | YP_001540109 |
Protein GI | 159040857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000339936 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000215213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGAGT TAAAAATACC AATACCACAT GAGTGGATAA TACTAGGCGC TGTTGGGCTT CTCATTGAAA TGGCCATAGG ATTCATTATA CAAATACGCA GAGGCATACT ATCATTATCC AGCCTAGGCA ACTTCATACC GATAAAAGGA CCCACACGCA ACTGGGGTAG TGGGGGTGCT TTATTAGCGG CCTTAGCCGC TGCATTCGCA TATCCATTCT ACGGTGCACC AATGACCTCA TGCCACAGTC AAGCATCATA CCTCAGTAGG CCTAGGGTTA AGGCTATTGC GCATGCATTG GTTTGGTGGG GTTTCGTATT GGCTGCAGTA TCCACTACCC TGGGCTTCGC ATTTGATGAG TGGGTTAACT CAACAACATT CATACCCGGT GGTAAACTGG GTGAAGCAGG ACCCTACGCA GTCATTGGAA CCGGGGCCCT TGGCGGTGTA TTGATAGTGG TGGGTTTCGT ATTAATGATG GTGGCTAGGT GGCAGGGAAC CATGCCTATT AATGAATCAG CCTTAACTGA CGTCTTCCTT TGGTTAGCCT TCCTAACAGC CCTAAGTGGC TTTGGGGTAA TGGGTGTTGA GTTAACAATA CCTGGTAATT ACTTAGCGGT TGAGTCAGCC TTCAGCGTAC ACATAATCAT TGTCCTACTC ATGTTCGCCA CAATGCCTTG GACTAAGTTT GGGCACGCCA TATACATGTA CGTGTGGCAG GTCTATGATA GGTATAGGAC TTGGAGGGGT ATTGAACCTA GGCTCCTTGG CCCATGGAGC GGTGAATTAG CTGAGAAGGC TCTTCACTCA CATCACCCTG CACATAAGCC CAAGGTGACC AGCTGA
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Protein sequence | MIELKIPIPH EWIILGAVGL LIEMAIGFII QIRRGILSLS SLGNFIPIKG PTRNWGSGGA LLAALAAAFA YPFYGAPMTS CHSQASYLSR PRVKAIAHAL VWWGFVLAAV STTLGFAFDE WVNSTTFIPG GKLGEAGPYA VIGTGALGGV LIVVGFVLMM VARWQGTMPI NESALTDVFL WLAFLTALSG FGVMGVELTI PGNYLAVESA FSVHIIIVLL MFATMPWTKF GHAIYMYVWQ VYDRYRTWRG IEPRLLGPWS GELAEKALHS HHPAHKPKVT S
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