| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0258 |
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| Symbol | |
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| ID | 5708680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 294934 |
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| End bp | 295323 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641274761 |
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| Product | nucleotide binding protein, PINc |
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| Protein accession | YP_001540096 |
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| Protein GI | 159040844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000462302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATGTGG GTGTTAGCGT AGTAGTCTTT GATACCAGTG CCCTACTCTT AGCTGTAACG
GAGAGGGTTG ATGTTATTAG TAATGTTAAG GAAACTGTTG AAGACTTAAT AATACCTGTG
GTGACTGTTA GTGTTATTAG GGAATTATGG CTACTGTCTA AGAGAGGGGG AAGGAGAGGG
AGGGCAGCCT CACTGGTGCT TGATAATATA GTACCCCGTT ACTTCTCAAT GGCTGCATTA
AACGGTAAGG CTGATGACGA CGTATTGAGT TTAGCCAAGG AAACAGGTGG ATTCCTGGTG
ACTTGTGATT CTGAGCTTAG AAGGAGGGCT GAGGGCAGTG GGGTTCCTGT AATATACTAT
AGGAGGGCTT TAAGGAGGTT CACTATTTAA
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| Protein sequence | MHVGVSVVVF DTSALLLAVT ERVDVISNVK ETVEDLIIPV VTVSVIRELW LLSKRGGRRG
RAASLVLDNI VPRYFSMAAL NGKADDDVLS LAKETGGFLV TCDSELRRRA EGSGVPVIYY
RRALRRFTI
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