| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0244 |
|---|
| Symbol | |
|---|
| ID | 5708546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 278548 |
|---|
| End bp | 279462 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641274746 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_001540082 |
|---|
| Protein GI | 159040830 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0626622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGAT TCATACCAAG GGAGCAGTTA ATGCAAATGA TTAATTACAG TGAGTTAGTT
GAAACAGTGA GGGATGCCTT AATTAAACTA CATAAAGGGC AGGGTGAATT ACCGCCTAGG
TTCAGTGCAA GCATTAGGGG TAATTGGTGG GGTTTAATGC TTGGTTACGT TGAGGGAATG
GGGATTGGTG TTAAGGTTGT TAACCTATAC CCCGGTAATG CTGCTAAGGG TATTGAGACA
ATACATGGAG TCGTCATACT GTTTAATGAA ACTGACGGCA CACCCCTCTT AGCAATGGAT
GGCTCATCAT TAACTGGATT AAGGACAGCG GCCGCATCAG CCTTAAGCAT AATGGCTACA
GACGCCTCCA CTGATGTGCT TGGCTTCATT GGTACTGGGG AGCAAGCCAG GTACCATGCC
TTAGTGTTTT CAAGATTATT TAAGGTGAGG GAGGTATACG CCACCAGTAG GGGGTTGGGT
AGGTTAATGG GATTCATTAA TTATGTTCAG GAATTAGGCA TTAAGGCTCA TGCAGCCGCC
AACGTGGAGG AGGTTATTGA TGAATGCGGC ACCGTGGTTA TTGCAACAAC CTCAACATCA
CCCGTATTAA CCATTAAACC AAGGCCTGGC TCACACGTAG TATCCATTGG GGCACCTAAA
CCAGTAAATG AGGTTAGCAG GCCTATTCTA GAAGGCGCCT CATGCATACT CGCCGATAAT
AGGGAGGCAG TGCTTAATGA GGCTGGGGAG GACTTCACGG GCCTGAGGCT AATGGATCTC
TCCGAGGTGC TTTCAGGTGA TGCAAAGTGC GTGAGGGGTA ATGGGTATAC TGTCTATAAG
TCTGTGGGAT TCTCAACACT TGACGTTGCA GCCGCCTACT ACGTGTATAG TGTCTACACT
AAGGGTAGTG TGTGA
|
|---|
| Protein sequence | MLRFIPREQL MQMINYSELV ETVRDALIKL HKGQGELPPR FSASIRGNWW GLMLGYVEGM
GIGVKVVNLY PGNAAKGIET IHGVVILFNE TDGTPLLAMD GSSLTGLRTA AASALSIMAT
DASTDVLGFI GTGEQARYHA LVFSRLFKVR EVYATSRGLG RLMGFINYVQ ELGIKAHAAA
NVEEVIDECG TVVIATTSTS PVLTIKPRPG SHVVSIGAPK PVNEVSRPIL EGASCILADN
REAVLNEAGE DFTGLRLMDL SEVLSGDAKC VRGNGYTVYK SVGFSTLDVA AAYYVYSVYT
KGSV
|
|---|
| |