| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0232 |
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| Symbol | |
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| ID | 5709010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 267533 |
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| End bp | 269896 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641274734 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540070 |
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| Protein GI | 159040818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAC TCAATAAAAA CACGATACTA CCAGTAATCA TAATAGCCGC AGTAATCATA
CTGTACAGCT CAATAACAGC ACACGCGCAA CAAAAGCCGC AATTCGTAAT ACCGACATGG
GGTACTTTAT TATATGTTCC TGGTAGCCCA GTATGGAATC CATATGCTCC TGGTAATGAT
ATTTGGTGGC CTACATCAGC CCCACCATTA GCGTTTTGGA GCGTATTCAC AGGTCAGCCA
TTACCGATTT TAGCTAAGAA TTGGACTGTT GAGGTTTTGC CTAATGGTAG TGGTATTTTA
ACGATTTACC TTAGGCATGA TATTTATTGG TTTAATGGTT CAGCTACAAT GCCTTTCACC
GCATGGGATG TTTACGCCTA CTTCTATATT GGTATGAAGG CTTTTGGTTG GTATGTGCCG
TTCATAAACC AATCCCTTGT TGATGAAGAC GTTAGAGTAC TAAACAACTA CACTATTCAA
TTCCTATTCC AGAAGTGGGC ACCATACATA CCATACTGGA TCTTAACAAG TAATACACCA
ACACCGTACT CAGTTTGGAA ACCAATAGTC GATGCATTAA AAACAATGAA TGTAACACAA
GCCATAGAAT TTGGTTCAAC GAATATAACG AAGTTTGTAC CACCATACTG GGGTCTTGGC
CCATATTACA TGACCTCAAT AGGCTCTAAC TTTGTAGCAT ATACACTAGA GCCCTTATAC
TTTAATGGTA TACCACTTCT AGCAACATGG CTTAAAATAT TACCATGGGA GTCATGGACT
TATTATGATC CAACTATAAT TAATAAGTTC ATCCCAGGGG GAACAGCCTC AATATTAACA
ATGATTGAGG CTCACCAAAA CATGGGATAC ATAAGTGTTG GCTGGACTGC TCAGCAGCTT
AAAATCATAA ACAGTACACC AGGTTATGCT GTTCTTTGGT ATCCTGGATT CTGGTCATTT
GGTATTGCTC TCAATCCTTA CGTATATCCA TTCAACTTAC CTCAAGTAAG GCAAGCCTTC
TGTTACGCTG TAAATAGGAC TGAGGTCTCA TTATCATGGA TATCTTCCCC AGCACCTTAT
CCTGCCCCTG TTACACCAAA TGTAGCGTTC ACTTTCCCGG CATCAGTCCT GAAATACTAC
ATCCCATGCA CATATAACTT AACTTATGCC AGTGACTTAC TCAAGTCTGC CGGCCTCACC
TATAAGAATG GTCAATGGTA CTTACCTAAT GGTACATCAT TAACAATCTT AATCTCTGGT
CCAAGTGGCT GGACATACTT TATGACTCAA GGTGAGGTTG TTGCTGAGGA ATGGTCAGCT
TTCGGTGTTC CCACGAAGGA ATTAAGCCTT GATTTAAGTA CATATTTTGG TACCATTTGG
CCTCATCTTG AGTGGGAGGC CGCAGAGATT CAGGCGCCAG AATTTCTAGT GCATAGTTAT
GAATCCGCAT GGACCTATTT ATCTAGTCAA TCCTGGATTA CTACTTTCAT AAACATCAGT
AAGCCTTGGC CATTCGCATG GCCTACTACG TCAAACGGCA AGATCACTGG CTGGTACTGC
TCACCAGTAA CAGTTACTGT ACCATCAATG TATAATAGTA CTCCACCTTA CTTAAACGGC
ACTATTGTGA CGTGTGTTAA CTCAACGTTT GGGTACATTA ATTTAACAAA TTGGTTTAAT
ACATATGATG TGTCAACTCC AGGAAGCAAT TTATATGAGT ACTTAACGGA GGTCTTATTT
GCATGGTATG ATTACTATGT TCCTGTAATA CCGATAGTCT ATTACCCATA TATAAAAGTT
TATCAGCCAA GTTACATGGA TCCGCTATGG CTCTATAAGT GTGCATTACC TTATGCATCA
ATTATGTTCT ACAATATACT GGATGCTCAT GAGAATGGTG GCCAATGGAA TGTATGGGCA
GGTTCACCTA GGGAATGGCT TGACCTTGGA GCAATAGCTC CGCCGCCAAA TGTACCACCT
TTAGCTCAAT TAATCGCTAA TGGTAGTCTT TGGACTAAGT ATCCTCAGTT TGCGGCTTAC
CTAGGTATTC CTAATCCTGA TCCAAGCCTA CAGCAGTGTG TTGCATCGTA CTTCCATATA
CCGTATACTC CAGTATCAAC CACTACACCA GTAACCACTA CTTCAACTAC TACTTCAACA
GTAACCACTA CTGCTGTTAG CACTGTTACA AGCACAGTCA CAACCACTGC CGTAAGCACA
GTGACTAGTA CAGCAACAAC CACAGCAGTA TCCACAGTAA CCGTGACTAA ACCAGTAATA
TCAACAGCAC TAATAGCAGG AATAGTAATA ATAGTAATAG TCATAGCCAT AGTAGCAGCA
ATAATAACAC TAAGAAGAAG ATGA
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| Protein sequence | MPKLNKNTIL PVIIIAAVII LYSSITAHAQ QKPQFVIPTW GTLLYVPGSP VWNPYAPGND
IWWPTSAPPL AFWSVFTGQP LPILAKNWTV EVLPNGSGIL TIYLRHDIYW FNGSATMPFT
AWDVYAYFYI GMKAFGWYVP FINQSLVDED VRVLNNYTIQ FLFQKWAPYI PYWILTSNTP
TPYSVWKPIV DALKTMNVTQ AIEFGSTNIT KFVPPYWGLG PYYMTSIGSN FVAYTLEPLY
FNGIPLLATW LKILPWESWT YYDPTIINKF IPGGTASILT MIEAHQNMGY ISVGWTAQQL
KIINSTPGYA VLWYPGFWSF GIALNPYVYP FNLPQVRQAF CYAVNRTEVS LSWISSPAPY
PAPVTPNVAF TFPASVLKYY IPCTYNLTYA SDLLKSAGLT YKNGQWYLPN GTSLTILISG
PSGWTYFMTQ GEVVAEEWSA FGVPTKELSL DLSTYFGTIW PHLEWEAAEI QAPEFLVHSY
ESAWTYLSSQ SWITTFINIS KPWPFAWPTT SNGKITGWYC SPVTVTVPSM YNSTPPYLNG
TIVTCVNSTF GYINLTNWFN TYDVSTPGSN LYEYLTEVLF AWYDYYVPVI PIVYYPYIKV
YQPSYMDPLW LYKCALPYAS IMFYNILDAH ENGGQWNVWA GSPREWLDLG AIAPPPNVPP
LAQLIANGSL WTKYPQFAAY LGIPNPDPSL QQCVASYFHI PYTPVSTTTP VTTTSTTTST
VTTTAVSTVT STVTTTAVST VTSTATTTAV STVTVTKPVI STALIAGIVI IVIVIAIVAA
IITLRRR
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