Gene Cmaq_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0215 
Symbol 
ID5708549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp251276 
End bp251767 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID641274718 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001540054 
Protein GI159040802 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCC AGGTTGAGTC TGAGCCTATT GGGAGAGAAC TAACGGAAAG GCAGCTTCAA 
ATACTGCAGT TCCTACTGAA GAAGGCTCAA CCACTGAGAG TGTACACTGT TTACGCGGAT
CAAGACCAGA TAGCTAGGGA ACTAGGCATG ACTAGGCAGG CCCTATCAGT GCACTTGAAG
AAGCTTAAGG ACTTTGGATT AATAAGGACT GGGAGAGAGT TCGTTGACGT CACTGAGAAG
GCGCTGAGGG TTCTCAGGAT GAGTGGTGCA GAGGCTATAG TTATGGCTAA GGTTGCACCT
AAGTATAGGC AGCAGGTTTA CGAGAAGCTT AAGGAAATGC CCATAGAGAA GGCCTACAGG
GTTTCCGGTG ACTATGACTT AATAATAATA GCCAGGGAGA TACATATTAA TGATCTGCTC
CGAATAATGA GCCAAATGGA GGGTATTGAG GACACTAGAA CATTCATATC ACTGGAGGTA
ATTAAGGAGT AG
 
Protein sequence
MESQVESEPI GRELTERQLQ ILQFLLKKAQ PLRVYTVYAD QDQIARELGM TRQALSVHLK 
KLKDFGLIRT GREFVDVTEK ALRVLRMSGA EAIVMAKVAP KYRQQVYEKL KEMPIEKAYR
VSGDYDLIII AREIHINDLL RIMSQMEGIE DTRTFISLEV IKE