Gene Cmaq_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0207 
Symbol 
ID5709702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp244874 
End bp246046 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content47% 
IMG OID641274710 
ProductAltronate dehydratase 
Protein accessionYP_001540046 
Protein GI159040794 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA GGCCAACGGT AATGGGTTAC ATTAGGCCAG ATGGTAGAGT TGGTATTAGG 
AACCACGTCC TAGTATTATC AACAGTAATA TGCTCAAGCA TAGTAACCCG TAGAATTGCT
GATCAGGTAA AGGGTGCAGT GGCTATTGAG AATCCCTTCG GCTGCGGGCA ACTTGAACCA
GACCTACAAG TCACTAAGAG GACTCTTGCT GGAATGGCTA AGAACCCTAA TGTGGGTGCA
GTATTAGTTG TTGGCCTTGG ATGTGAGCAG ATTCAGGCTG ATGAACTTGC TGATGAAATA
GCCAAGACAG GTAAGCCTGT TGAGAGGGTG GTTATACAGG AGGAGAACGG TGGTACACCA
GCGGCTATTG AGAAGGGTGT TAAGTTGCTC AGTAGGATGG CTGAGGAGAC TCTTACCCAG
AGGCCAACTG AAGTGGATGC ATCATCACTA GTAATGGGTG TTGAATGCGG TGGTTCAGAT
GCCACATCAG GCTTAGCCTC AAATCCAGTT GTGGGTTATG TGTCAGATAG GTTAATTGAC
TTAGGGGGAA CAGTTATTTT ATCGGAGACC CCTGAGATGA TAGGGGCTGA GGATATTTTA
GCTAAGAGGG CTGCATCAAA GGAGGTGGCT GATAAGGTTT ACAATGCAAT TAGGAGGTGG
GTTGAATTAG CTGCATCACA TAACGTTGAC TTAGTTGGTA CTCAACCAGC CCCTGGAAAC
ATAGCTGGAG GCATATCCAC AATTGAGGAG AAGTCGCTTG GTGCCATAAT TAAGGGTGGG
TCAAGGCAGA TTCAAGGCGT ATTAAATTAT GCGGAGGAGG TTAAGGGTAA GGGCCTCTGG
ATAATGGATA CTCCAGGTTA CGACATAATG TCAGTGGTGG GTATGGTGGC TGGGGGAGCA
ACACTAGTAG TGTTCACCAC AGGTAGGGGG ACTCCAACCG GTAATCCAAT AGCCCCGGTG
ATTAAGGTGA CCGCTAACCC ATACACATAC GGTAAGATGA AGGAGAACAT TGACTTCGAT
GCAAGCACCG TGATTAATGG CACTGAGACT GTTGAGCAGG CTGGGGAGAG GTTACTTAAC
CTTGTCCTTG AGGTCGCCAG AGGTAGGCAT ACTAAGGCTG AGTTACTTGG GCATACGGAA
TTCATGATAC ATAAGATAAT ACCATCCTTC TAA
 
Protein sequence
MSSRPTVMGY IRPDGRVGIR NHVLVLSTVI CSSIVTRRIA DQVKGAVAIE NPFGCGQLEP 
DLQVTKRTLA GMAKNPNVGA VLVVGLGCEQ IQADELADEI AKTGKPVERV VIQEENGGTP
AAIEKGVKLL SRMAEETLTQ RPTEVDASSL VMGVECGGSD ATSGLASNPV VGYVSDRLID
LGGTVILSET PEMIGAEDIL AKRAASKEVA DKVYNAIRRW VELAASHNVD LVGTQPAPGN
IAGGISTIEE KSLGAIIKGG SRQIQGVLNY AEEVKGKGLW IMDTPGYDIM SVVGMVAGGA
TLVVFTTGRG TPTGNPIAPV IKVTANPYTY GKMKENIDFD ASTVINGTET VEQAGERLLN
LVLEVARGRH TKAELLGHTE FMIHKIIPSF