| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0172 |
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| Symbol | |
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| ID | 5709030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 202561 |
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| End bp | 205245 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641274675 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001540011 |
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| Protein GI | 159040759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.192026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCACG GTTTAAGAAT CATAGACGCT AGGGTTGAAT TCACGGTTAA TCCCCTTGGT
ATTGATGAGA GTAAGCCCAG GTTCTCCTGG ATTCTTGAGC ATGAGGAAAG GGGGCAGTAT
CAATCAGCCT ATAGGGTAAT AGTGAGTAGT AGCCTTGAGA ACGCTGTTAA GGGTATTGGT
GATGTGTGGG ATAGCGGTAA GGTTAATTCA AGGGATCAAG TCATCAAATA TAATGGACCA
CCCTTAAGTA GCTTCACTAA GTATTACTGG AGGGTTAAGG CATGGGATTC AAATGGCGTT
GAGGGGGATT GGAGTGATGT TCAATGGTTT GAGACAGCGG TACTTAAGCC TGAGGAGTGG
AGTGGTAAAT GGATTGGTGG AGGTCAGTTA CTGAGGAGGA GCTTTAGGGT GGAGGGTAGT
GTGATTGAGG CCAAGGCCTA TGTAACTGGT TTAGGTTACT ATGAGCTTAG GATAAATGGT
GAAAGGGTGG GGGATAGGGT CCTTGACCCA CCTTGGAGTG AGTACGATAA GACAGTCTAC
TACAGTGTCT ATGATGTAAC CAACCTAGTT AAGAGTGGGG AAAACGTCAT TGGCTTAATA
CTAGGTAGGG GGAGGTATGG GCCTGTTTCA CCTAACCGGG CCCAAATACC TGGCCTCAAG
TACTATGATG AACCTAAGGC AAGCGCCATG ATTAGGATCA GGCTGAGTGA TGGATCAGTC
ATCACCATTA ACACTGATGA ATCCTGGAAA TGCCTAGTTA AAGGCCCCAT ACTCTACGAC
GACATATATA ACGGGTACAG GTATGACGCT AGGCTGGAGC CCTACGGCTG GGATAAGGCC
GGCTTCGATG ACTCAAACTG GGTACAATGC AGTGTAGTTA AGCCACCTGG TGGTAGGCTT
AGGTCCACTG CCGCAGTACC TGGAACCAAG GTTAAGGGAA CATTGAAGCC TAGGGAGTAT
TATAATCCAA GACCTGGAGT CTATGTTTTT GACTTTGGGC AAAACATAAC CGGTTGGGTT
AGGCTTAGGG TTAGGGGGAG TAGTGGTGTT GAGGTTAAGG TTAGGCATAG TGAGGTCATT
AATTCCGATG GATCACTTAA CGTTGAGAAT ATTCGCGGCG CCGAGGCCAC GGATACATAC
ATATTAAGCG GCAGGGATGT TGAGGTTCTT GAACCCAGGT TCACTTACCA CGGCTTCAGG
TACGCTGAGG TGACTGGTTA CCCAGGTGTA CCGTCTATTG ATGATGTTGA GGCCGTTATT
GTTCAAACGG ACTTTGAGTC AACTGGATCA ATAGCTACGT CAAGTAAAAT AATTAATGAT
ATCCACAGGA TCACTTGGTG GAGCCTAAGG GCTAACCTAC TTAATGGTAT TCAGACGGAT
TGCCCGCAAA GGGATGAACG CATGGGTTGG CTTGGGGATG CTTGGTTATC CTCAGACTCA
GCCGTGTTTA ACTTCAACAT GGTTAAGTAC TATGAGAAGT TCATTCGTGA TATTATTGAT
TCACAGAGGG ATGATGGCTC AATACCGGAT ACTGTACCAC CTTACTGGAA TACGTACCCA
GCTGACCCAG CTTGGGGAAC AGCCTTAATT TACATTCCAT GGCTACTCTA CGTGCATTAC
GGTGACGTGG AAATTCTTGA GGAGGCTTAT GAAGCTATGA AGAAGTGGTG GAGTTTCCTC
AACTCAAGGG TTAAGGATAA TGTACTCTAC TTCAGTAAGT ATGGTGAATG GGTACCACCA
GGTAGGGTCT TCTCAGCTGA ATACTGCCCA CCTGAAATAT TATCAACATG GATACTTTAT
AGGGATACGT TAACCCTGGC CCAAATAGCC AAGGTGCTTG GCCGTGGTGA AGACGCCAGC
TTCTTCACTA AGAGGGCTGA GGAAATTAGG GATGCCTTCA ATAGAGTTTT CCTAACGGAA
CGCGGCTACT ACTCAAAGTA CACTGCCCCT GATGGTTCAG TTAGAATGCT TGGTGGTTCA
CAAACATGCA ATGCCCTACC CCTCTACCTC GACATGGTAC CCGGCAATAG GGTTAACGAC
ATAGTTAAAG CCCTAGCGCA TAATATTGAG GCTGATTGGG ATAGGCACTT AGTGGTGGGT
ATATTTGGGG CGAAGTACGT ACCCGAGGTC CTGGTTAAGT ACGGTTACGT TGATTTAGCC
TACAGGGCTG TGACGCAGGA ATCGTACCCA GGCTGGGGGT ACATGATTAA GGAGGGTGCA
ACCACACTGT GGGAGAGGTG GGAGAAGCTC ACTGGGGCTG GTATGAATTC CCATAATCAC
CACATGTTTG GGAGCATTGA CGCATGGTTC TACAGGGATT TAGCCGGGTT AATGACCCTG
GAGCCGGGTT TCTCAAGAAT AATGATTAAG CCAAACATAC CCAGTGAGTT GAGGTATTGC
TCAGCATCAT TATACACTGT TAGGGGGCTT ACCTCAGTTG AGTGGAGTAG GGTTAATGAT
GAACTGGTGG TTACGGTTAC TGTACCCGTT AATTCAACCG CAGAGGTTCA CTTACCTAAA
CTGGGTGAAT CAACGGTAGT GAGGGAGGGT GATAAAGTGC TTTGGAGTGG GGGTAAGGTG
GTTGAAGTTA GCCCTGGGGT ATTATCGGTT AAGGATGCTG GGGACCGTAT AGTGGTTGAG
GTTGGTTCAG GGAGATTCAT ATTCACCATT AAGACAATTA ACTAA
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| Protein sequence | MVHGLRIIDA RVEFTVNPLG IDESKPRFSW ILEHEERGQY QSAYRVIVSS SLENAVKGIG
DVWDSGKVNS RDQVIKYNGP PLSSFTKYYW RVKAWDSNGV EGDWSDVQWF ETAVLKPEEW
SGKWIGGGQL LRRSFRVEGS VIEAKAYVTG LGYYELRING ERVGDRVLDP PWSEYDKTVY
YSVYDVTNLV KSGENVIGLI LGRGRYGPVS PNRAQIPGLK YYDEPKASAM IRIRLSDGSV
ITINTDESWK CLVKGPILYD DIYNGYRYDA RLEPYGWDKA GFDDSNWVQC SVVKPPGGRL
RSTAAVPGTK VKGTLKPREY YNPRPGVYVF DFGQNITGWV RLRVRGSSGV EVKVRHSEVI
NSDGSLNVEN IRGAEATDTY ILSGRDVEVL EPRFTYHGFR YAEVTGYPGV PSIDDVEAVI
VQTDFESTGS IATSSKIIND IHRITWWSLR ANLLNGIQTD CPQRDERMGW LGDAWLSSDS
AVFNFNMVKY YEKFIRDIID SQRDDGSIPD TVPPYWNTYP ADPAWGTALI YIPWLLYVHY
GDVEILEEAY EAMKKWWSFL NSRVKDNVLY FSKYGEWVPP GRVFSAEYCP PEILSTWILY
RDTLTLAQIA KVLGRGEDAS FFTKRAEEIR DAFNRVFLTE RGYYSKYTAP DGSVRMLGGS
QTCNALPLYL DMVPGNRVND IVKALAHNIE ADWDRHLVVG IFGAKYVPEV LVKYGYVDLA
YRAVTQESYP GWGYMIKEGA TTLWERWEKL TGAGMNSHNH HMFGSIDAWF YRDLAGLMTL
EPGFSRIMIK PNIPSELRYC SASLYTVRGL TSVEWSRVND ELVVTVTVPV NSTAEVHLPK
LGESTVVREG DKVLWSGGKV VEVSPGVLSV KDAGDRIVVE VGSGRFIFTI KTIN
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