| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0152 |
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| Symbol | |
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| ID | 5709107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 179001 |
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| End bp | 179750 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641274655 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001539992 |
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| Protein GI | 159040740 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.57312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGATG ATTACGTTAA CTCATTGTTA AGGATGATTG GTTTATCTAA GTATCAGCTT
AGGGTGTACT TGACCTTGGT TGAGAGGGGG CCTTTAACGG CTGGTTTAAT AGCGAAGTAC
GCTGATGTGC CTTCATCTAA AGTTTACAGT GTTTTAAAGA GCATGGTTAG GTTGGGTTTG
ATTGATGTTG ATTCAGGTAA GAGGCCTGAG GTTTTCGTGG CTAAGCCACC TAAGGAGATG
TTTAATATTG TGGTATCTAG GATTAATGAT ATTGTCGAGA AGGCTAAGCC CATGATTAAT
ACCCTTCAGA TGATTTATGA GGCTTCAAAC CAAAGGACGA TTAAAGCTAG GAGTGAAATG
CTCTTCACTG TTAAGGGGCT TCAGAACACT AAGAATTTAG CCAGGGTGAT TATGCTGGGT
AATGTGAAGG AGGTTAGTGT TGCAATACCA TATAGCCAGC TTCTTGATGA TGAGGTTGCC
TCAATGATTA TTGAGGCCAC GGAGAAGTCT GAGGTTAAGT TACTTGTTAC AAGGGATCTA
GTTGATTACG CTAAGACCCT ACCACCCAGG GTTAGTCTTA GGGTTAGGGA TATGATGTTC
GGCGCAGGCT TCATTGGGGA TGGAGTATTA TTAACTATTC AATATGGTGC CGACTACCTA
TCACTATACT CCACTCAGGA GTATATTATT GAGATAGCTA AGACGTACTT TGAAACCCTA
TGGAGGGAGT CAGAGCCCAT TAATAGGTAA
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| Protein sequence | MMDDYVNSLL RMIGLSKYQL RVYLTLVERG PLTAGLIAKY ADVPSSKVYS VLKSMVRLGL
IDVDSGKRPE VFVAKPPKEM FNIVVSRIND IVEKAKPMIN TLQMIYEASN QRTIKARSEM
LFTVKGLQNT KNLARVIMLG NVKEVSVAIP YSQLLDDEVA SMIIEATEKS EVKLLVTRDL
VDYAKTLPPR VSLRVRDMMF GAGFIGDGVL LTIQYGADYL SLYSTQEYII EIAKTYFETL
WRESEPINR
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