| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0129 |
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| Symbol | |
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| ID | 5708594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 153724 |
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| End bp | 155568 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274632 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001539970 |
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| Protein GI | 159040718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGG ATTTCGGTAT CAAAACCGAT AGAGAACTAC GTAAAGCTTT AAATAGGCGT
AGGTTATTGT TTCTCTCGAT TGGTGAAATA ATCGGTGCTG GTTGGTTGTT TGCACCCATG
TATGCCGCCT CCTATGCCGG TGGCGCTGCC TTATTGGCCT GGATAATAGC CGGCATCATA
ATACTGCTCG TAGCATTAGC TAATGCTGAG ATTGCCTCCG CGATACCGAA GTCAGGCGCA
CTTGTTAGAT ATCCACACTA CGTGTTTGGT GGCTTTGCTG GTTTTTTAAT TGGTTGGTCT
TATTTCTTAG CCATAACGGC TGTACCACCC ACAGAGGCTT TAACGGCGAC TCGATATTTA
TCCTTCTTCT TTCCACAGCT ATACAATCCT CATACCGGCA TCTTGACGGC GCTTGGTTAT
GTTGTTGCCT ATCTATTCCT AGCATTATTC ATCTATGTAA ATTACATAGG TGTTAAGGCC
GTTGGTGATA CGGTCTATGG CCTTGGCTGG TGGAAATTAC TGATACCCTC AATAACCGCG
ATGATAATGA TAGCCTTGGC ATTCAACCCG GCTAATTTCA CCGCTGGCGG TGGTTTCATA
CCAACGAGTG GCACTGCACC GTACACGGGT TGGGCAGCGG TATTTTACGC GATGCCAACT
GGAGGCGTTT TATTTGCTTA CCTCGGTTTT AGGCAGGCTA TTGAGTATGG TGGTGAAGGT
AAAAATCCCA GTAAGGACAT CCCCTTTGCA ATCATAAGCG CGATATTAAT AGCAATGACA
ATATACATAC TACTTGAGCT CGCCTTCATA GGTGCAATAC ACTGGGACGT AATTGGTGTT
AAGGAGGGTG CCTGGGCAGC ATTGAGAACA TCCTCAATAT CTAAGGCGCC AATAGCACAG
TTGCTAGAGT CCCTCAAGTA CGTCGTGCCA GTAGCTGTCG CGTTTTTAGC TGCTTGGGTC
GTGGTATTTC TAACAGATGC CGTTATATCA CCTGCAGGTA CAGGATTTAT ATCTACGGGA
GGCGCAACTA GGGCGCTCTA TGGAATCGCG GCTGACGGTT ATTTACCACC TTGGTTCCTT
GTATTAAGCC GTACAAGAAT ACCAAAGTGG TCCCTCATCA CAATAGCGGT ACTTGGCGCC
TTGTACCTAT TGCCGTTTCC AACCTGGCAA TCAATAGTTT CGTTCACAAC AGTTGGTAGG
GTACTCACGT ACATGGTCAC TGGTGGTATA GCTGTGCAGG CACTGAGGAG GATTGCGCCC
GATCTTCCTC GCCCATTCAG GTTATGGGCT ACATCGGTAT TAGCCCCAGT AGCGACGCTT
GCGGCATCCC TAATTATTTA CTGGTCGGGG TTCAGTACGG TATCTAAGTT CTTTCTGGCA
GTATTCGTGG GGTTACCCAT TTACTTTGGT TATTATGCGT ACAAGAGATT AAATGTAAGT
CTTCCTCTGT CATTAACTTT AGGCTTCATT GATGCTATAG GCGTGGCTGC AGCATTTTCT
TACTTCTATA GTGTGACTAA GGGGTTAAGG GTTTATAATG ACACGGGCCT GCTAATGTAC
ATAATCGTCG CGGCTGTGTT AATATACGTT AGCATGGCCA TACTTTATAG ACTAGGTAGT
GATTACTTAA GGAGGGAATT TAAGGCTGGG GTTTGGTTCC CAACTTACAT GATTGTGATC
ACGTTACTTT CTTATTATGG CTCTTTCGGT CTACGTAAAG CGATACCCTT CCCGATAGAC
ACGGTAATTG CTGCAATAAT AACATTGGTA TTTCATTATT GGGCTGTTTA CAGTGCATTT
AGGACGAAGG CAATAGACCA GATAATGGAG GAAATAAAGA GATAA
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| Protein sequence | MAEDFGIKTD RELRKALNRR RLLFLSIGEI IGAGWLFAPM YAASYAGGAA LLAWIIAGII
ILLVALANAE IASAIPKSGA LVRYPHYVFG GFAGFLIGWS YFLAITAVPP TEALTATRYL
SFFFPQLYNP HTGILTALGY VVAYLFLALF IYVNYIGVKA VGDTVYGLGW WKLLIPSITA
MIMIALAFNP ANFTAGGGFI PTSGTAPYTG WAAVFYAMPT GGVLFAYLGF RQAIEYGGEG
KNPSKDIPFA IISAILIAMT IYILLELAFI GAIHWDVIGV KEGAWAALRT SSISKAPIAQ
LLESLKYVVP VAVAFLAAWV VVFLTDAVIS PAGTGFISTG GATRALYGIA ADGYLPPWFL
VLSRTRIPKW SLITIAVLGA LYLLPFPTWQ SIVSFTTVGR VLTYMVTGGI AVQALRRIAP
DLPRPFRLWA TSVLAPVATL AASLIIYWSG FSTVSKFFLA VFVGLPIYFG YYAYKRLNVS
LPLSLTLGFI DAIGVAAAFS YFYSVTKGLR VYNDTGLLMY IIVAAVLIYV SMAILYRLGS
DYLRREFKAG VWFPTYMIVI TLLSYYGSFG LRKAIPFPID TVIAAIITLV FHYWAVYSAF
RTKAIDQIME EIKR
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