| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4968 |
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| Symbol | |
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| ID | 5706180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5639817 |
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| End bp | 5640683 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641274363 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001539705 |
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| Protein GI | 159040452 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.14214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAACT GGCCGTTGAC CATCGGGGTG ACCGCGGGGG GAATGGTCGG GCTCGGGGTC
TTCCTGGTGG TCCGGGAACT CCTGCCGGCG ACTCCGGCGC TCGGTCCCGC GCTGCGGCGG
CTGCACCAGC CGTCGGGCTC GCACCCGGCC GCGTCCGCCG GGCACCGGCT GGAATGGCTG
ACCGGGCTCG CCCGGTGGCT GCGTCCACCG CACCAGCAAC TCGCCCTGCT CGGCCGCACG
CCCGAGCAGT ACGCCCTGTC GCTGCTGCTC TCCGCGTTGA TCGGACTGGC CTCGCCGACC
CTGCTCAGCA TCACGTTCGC CGCCACGGGT GTCGGGATGC CGGTGGCCGT ACCGGTGCTG
GGCAGTCTCG GTCTGGCGCT GCTCTGCGCG TGGCTTGCGC ACCGCGCGGT GCTGACCAAG
GCGGAGGCGG CCCGGGCCGA GTTCCGGGCG GCCGTCTGCA CCTACCTGGA TCTGGTGGCG
TTGCAGCTCT CCGCCGCGCA CGGGCCGGTG CAGTCACTGG AGCGGGCGGC GGAGGTCTGC
GACGGCTGGG TCTTCGACCG GATTCGGGAG TCGCTGCGGC TCGCCCAGCT CCAGATGCAC
TCACCGTGGG ACGAGTTGCG GGACCTCGCC GACCGGATTG GTATTCCCGA GCTGGGCGAC
GTGGGCGCGA TCATGCGCTC TTCGGGCAGC GAGGGTGCGC AGGTGCACGA AACCCTGCGC
AGCCGTGCCG ACTCGCTGCG CGACCAGATC CGCACCGACA ACCTGGCTCG GGCGGAGGGG
GTGACCGGTC GGCTGGACAT CCCCGGTGCC CTGCTCGTCT TCGTTCTGCT CGGCTTCGGG
ACCTACCCGT TCGTTGCCCG TCTCTGA
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| Protein sequence | MTNWPLTIGV TAGGMVGLGV FLVVRELLPA TPALGPALRR LHQPSGSHPA ASAGHRLEWL
TGLARWLRPP HQQLALLGRT PEQYALSLLL SALIGLASPT LLSITFAATG VGMPVAVPVL
GSLGLALLCA WLAHRAVLTK AEAARAEFRA AVCTYLDLVA LQLSAAHGPV QSLERAAEVC
DGWVFDRIRE SLRLAQLQMH SPWDELRDLA DRIGIPELGD VGAIMRSSGS EGAQVHETLR
SRADSLRDQI RTDNLARAEG VTGRLDIPGA LLVFVLLGFG TYPFVARL
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