Gene Sare_4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4898 
Symbol 
ID5707414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5564549 
End bp5565181 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID641274293 
ProductABC transporter related 
Protein accessionYP_001539638 
Protein GI159040385 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000896239 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGTGG CGGTCGACGT TCGGCAGGTA ACGGTCAGGT ACGGTTCGAC GCTGGTCCTG 
GACGGCATCG ACCTCCGGAT TCCCGAGGGC GCCGCCGTCG CGCTCGTCGG TGAGAACGGC
TCCGGGAAGT CCACTCTGCT GCGCTGCGTC ACCGGCCTGC AGGAGCCCTC CGCCGGCGAC
ATCTCCGTCT TCGGGACCGC GCCCGGGTGC GGTGCGACCT TCTGGCGGCA CGTCGCCACC
ACAGTGGAGT CGCCGAGTTG GTATCAGGGC TTGACCGTAC GCGAGCATCT CGACCTGGTC
CGGGTGGTCA ACGGCGGCGA CCCCGGCGAC GGACACATCG ACGAACTCTG CGTCACCCTT
GGCCTGATCG GGCTCTGCGA CAGCCTGCCC AGCACATTGT CCTCCGGACA GCGTCAGCGC
TTCCTGCTCG CCGCGACCCT CGTGCGGCCC AGCCGACTAC TCGTCCTCGA CGAACCTGAG
CAGCGCCTCG ACGCCCGGAT CAAGGGTGCG ATCGCGGCGC ACCTGCGCAT GTACGTGCAG
GCCGGCGGCA CGCTGGTGAT GGCCTGCCAC GACGACGGGT TCCGGGCCGG CGTCGGCGCG
GGCGAGGTCG TGCTCACCCG CCCGGAGGTC TGA
 
Protein sequence
MSVAVDVRQV TVRYGSTLVL DGIDLRIPEG AAVALVGENG SGKSTLLRCV TGLQEPSAGD 
ISVFGTAPGC GATFWRHVAT TVESPSWYQG LTVREHLDLV RVVNGGDPGD GHIDELCVTL
GLIGLCDSLP STLSSGQRQR FLLAATLVRP SRLLVLDEPE QRLDARIKGA IAAHLRMYVQ
AGGTLVMACH DDGFRAGVGA GEVVLTRPEV