Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4873 |
Symbol | |
ID | 5707565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5524840 |
End bp | 5525622 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274269 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001539614 |
Protein GI | 159040361 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.686737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0317113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTAG CCATGCTGAC GATCGGACAG CTGGCGTCCT ACGCCGGGGC TTCCATCCGT GCCGTGCGGC ACTACCACCA GATCGGGCTC CTGCCGGAGC CGGAACGTGA CGCCTCCGGC TACCGGAGCT ACGACGCTGC CGCCGTGCTG CGCCTCATCC GGATCCGGAC CCTGGCCGAG GCCGGCGTCC CGCTGGCCCG GGTCCGGGAA CTGCTCGATG CCGGCCCCGA GACGTTCGCC GCCGCGACTA TCGAGATCGA CCGGGAGTTA CGGGCGCGGG TCCGCACCCT TCAGGAACAC CGGCGGCGGA TCACACGGCT GAACTCCGTC GAGTCGCTGG CGGTCCCCAA GGAGGTGGCC GACTACCTGA ATTGCCTCCG GGCCATCGGA GCCCCATCCG CGCTCGTCGA GGTGGAGCGC GATGCGTGGA TTCTTGTGGC AGCGCGCTAT CCAGAGACGA TTTCGGCGAT CATCGCTGAC AAGGTGGCCC AGCTCGCCGA CGCGAGGATC CTCCGGCTCT ACCAGCTCCT CGGTCGGCTC ACCATGGAAT CGGAAAGCGA CGACCTGCTG CGCGAGATTG CCGACCTGAT GAGTGACCTG TACGAGGAGG CAGCGGCGAG CGGGGACCTG GACCGGCAGG ACGAGGTCAT GCCCGACAAG GCGTTCGTCC GGCTGCTGGA CTCGTTCTCC TACGCCGCCC ACCCCGCCGT CGCGCGGCTG GGGAAGCTGC TCGCCGACCG TGGCTGGACC GGGTGGAGCC AGGTCGAGAA ACGCAAGCCT TGA
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Protein sequence | MEVAMLTIGQ LASYAGASIR AVRHYHQIGL LPEPERDASG YRSYDAAAVL RLIRIRTLAE AGVPLARVRE LLDAGPETFA AATIEIDREL RARVRTLQEH RRRITRLNSV ESLAVPKEVA DYLNCLRAIG APSALVEVER DAWILVAARY PETISAIIAD KVAQLADARI LRLYQLLGRL TMESESDDLL REIADLMSDL YEEAAASGDL DRQDEVMPDK AFVRLLDSFS YAAHPAVARL GKLLADRGWT GWSQVEKRKP
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