| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4818 |
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| Symbol | rpsD |
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| ID | 5707939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5447417 |
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| End bp | 5448025 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641274214 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001539559 |
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| Protein GI | 159040306 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACCAGC CCCGCCCCAA GGTCAAGCGC TCCCGGGCCC TCGGCATCCC CCTGACCCCG
AAGTGCGTCC GCTACTTCGA GCGCCGCCCC TTCCCGCCCG GCCAGCACGG CCGGTCCCGC
AAGAGCACCA GCGACTACAA GGTCCGCCTG CTGGAGAAGC AGCGACTCAA GGCGCAATAC
CACGTCAGCG AAGGACAACT GCGACGGGCG TTCACCCGCG CGGCTCGGCT CGAGAGCAAG
ACGGGCGAGG CACTCATCGT CGACCTGGAG ACCAGACTGG ACGCGCTGGT ACTGCGATCC
GGTCTGGCGC GGACGATCTA CCAGGCCCGC CAGGTGGTCA CACACCGCCA TGTCACGGTG
AACGGACACC GGGTCGACCG TCCTTCGGCG CGGCTGCGCC CCGGTGACGT CATCGCCGTC
ACGGCCCGCA GCCGCACCAA GGCACCATTC CTCGTCGCGG CGGCCGGGGC ACACGCTCCG
GAACGGTCCG CGCCCTACCT GGCGGTCGAC CTCGCCGACC TGACCGCACG GCTGCTCCGG
CTGCCGTTGC GGTCGGAGGT GCCGGTGACC TGCCAGGAGC AACTCGTCGT CGAGCACTAC
TCCCGCTAG
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| Protein sequence | MNQPRPKVKR SRALGIPLTP KCVRYFERRP FPPGQHGRSR KSTSDYKVRL LEKQRLKAQY
HVSEGQLRRA FTRAARLESK TGEALIVDLE TRLDALVLRS GLARTIYQAR QVVTHRHVTV
NGHRVDRPSA RLRPGDVIAV TARSRTKAPF LVAAAGAHAP ERSAPYLAVD LADLTARLLR
LPLRSEVPVT CQEQLVVEHY SR
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