Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4716 |
Symbol | |
ID | 5707225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5339767 |
End bp | 5340657 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641274114 |
Product | hypothetical protein |
Protein accession | YP_001539460 |
Protein GI | 159040207 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000137269 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGGGCAGC GGGTCGGGAT CGGTGCAGTC GCCGTCGCTG TGGTGGCGCT TCTGGCAGGC TGCGCCGGGC CGAGCGACGG TGACCTGACC GACGACTGGG GGATGCTGCC CGCCGCCGGC CCGTTTGTCC CCGAAGCGGG GGTCTGCCAG GTGGCCGACG CGGCCGCCCA GGTGGCCCTG GCGGTGTACC AGCCGGTGGA GTGCTCGGTC CCGCATCGCG TCGAGACCGT GCATGTGGGT GTCTTCGTGA CGGAGCGGTC GGGCCCGCCG GCCGTCGGTT CGACCGAATT TCGGGGCGCG TTCGTCGACT GTGACAAGCG CACCACCAGG TACGTGGGGG ACGACTGGCG GGCCGGGCGG CTGCGGCTCT GGGTGGCTGT CCCATCCCTC TCGGGCTGGG CTGCTGGTTC CCGTTGGTAC CGCTGTGACC TCACCGAGGT GACAACCGTC GAGGCGGGAG CTGAGGTGGT TGTCCGCACC GGGAGCCTGC GGGATGCGCT GGTCGGAGAG TCACCGTTGC GGCTCGGCTG CCAGCAGAGT CGTCAGGATC GGGGTGGCGG GGTGTCGACC CTGCTCCCCG TGGATTGCGG AACCCGGCAC GACGCGGAGT TCGTCGGGGT GTGGCAGTCG CCGGACCTCC CGTACCCCAG CCGAGACGCC GACTGGGCGC CGTTCTATGC CGGCTGCCGC AGCGAGGTCG CGCACTTCGT CGAGGTGCCC GATGACGTGT TCCTGCGCCT GCGCACTGAC GTGGTGGTCC GTCCGCCCGC TGCCGACCGG TGGGAGGCCG GCGATCGGGG GGTCCGCTGC TACCTGTGGC TCAGCGGCCG TCAGGTGACC GGGTCGCTGA CGGGCGCGGG TCCGGCCCGG TTGCCGGTCC GGACCCGGTG A
|
Protein sequence | MGQRVGIGAV AVAVVALLAG CAGPSDGDLT DDWGMLPAAG PFVPEAGVCQ VADAAAQVAL AVYQPVECSV PHRVETVHVG VFVTERSGPP AVGSTEFRGA FVDCDKRTTR YVGDDWRAGR LRLWVAVPSL SGWAAGSRWY RCDLTEVTTV EAGAEVVVRT GSLRDALVGE SPLRLGCQQS RQDRGGGVST LLPVDCGTRH DAEFVGVWQS PDLPYPSRDA DWAPFYAGCR SEVAHFVEVP DDVFLRLRTD VVVRPPAADR WEAGDRGVRC YLWLSGRQVT GSLTGAGPAR LPVRTR
|
| |