Gene Sare_4679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4679 
Symbol 
ID5704306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5301596 
End bp5302132 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID641274077 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001539423 
Protein GI159040170 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.437677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG GTCATCCTGT GCAGCTCGAT GACCTCGACG TCGGCCTGAT CGAGCTGCTG 
GCCGAGGAGC CGCGGATCGG CGTGCTGGAG TGCTCCCGCC GCCTTGGGGT GGCCCGGGGC
ACCGCGCAGG CGCGGCTGGA CAAGCTGATC GCACGAGGGG TGATCGACGG GTTCGGCCCA
GAGGTGTCAC CTGCCGCCAT CGGCTTCGGG GTGACCAGCT TCGTCACTCT GGAGATCAGC
CAACGACACG GGCGCGACCC GGTCGCCGCC CACCTGGCAG CGATCCCGGA GGTGCTCGAG
GCACATACCA TCACCGGCTC TGGTGACCTG CTCTGCCGGA TCGTGGCCCG CTCCAACGCG
GACCTGCAAC GGGTGATCGA CCAGATCGTG TCGCACGAGA GCATCCGACG CGCCTCGACG
ATCATCGCCC TGGCCGAGCA GATCCCGCGC AGGGTTCTTC CCCTGCTCCG CTCCGCGGTG
CAGGCGGGGC CGCCATCGAC GGCTGCGGAG GAGCAGGGGG ATTCTCCTGG CTGCTGA
 
Protein sequence
MNTGHPVQLD DLDVGLIELL AEEPRIGVLE CSRRLGVARG TAQARLDKLI ARGVIDGFGP 
EVSPAAIGFG VTSFVTLEIS QRHGRDPVAA HLAAIPEVLE AHTITGSGDL LCRIVARSNA
DLQRVIDQIV SHESIRRAST IIALAEQIPR RVLPLLRSAV QAGPPSTAAE EQGDSPGC