Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4679 |
Symbol | |
ID | 5704306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5301596 |
End bp | 5302132 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274077 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001539423 |
Protein GI | 159040170 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.437677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTG GTCATCCTGT GCAGCTCGAT GACCTCGACG TCGGCCTGAT CGAGCTGCTG GCCGAGGAGC CGCGGATCGG CGTGCTGGAG TGCTCCCGCC GCCTTGGGGT GGCCCGGGGC ACCGCGCAGG CGCGGCTGGA CAAGCTGATC GCACGAGGGG TGATCGACGG GTTCGGCCCA GAGGTGTCAC CTGCCGCCAT CGGCTTCGGG GTGACCAGCT TCGTCACTCT GGAGATCAGC CAACGACACG GGCGCGACCC GGTCGCCGCC CACCTGGCAG CGATCCCGGA GGTGCTCGAG GCACATACCA TCACCGGCTC TGGTGACCTG CTCTGCCGGA TCGTGGCCCG CTCCAACGCG GACCTGCAAC GGGTGATCGA CCAGATCGTG TCGCACGAGA GCATCCGACG CGCCTCGACG ATCATCGCCC TGGCCGAGCA GATCCCGCGC AGGGTTCTTC CCCTGCTCCG CTCCGCGGTG CAGGCGGGGC CGCCATCGAC GGCTGCGGAG GAGCAGGGGG ATTCTCCTGG CTGCTGA
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Protein sequence | MNTGHPVQLD DLDVGLIELL AEEPRIGVLE CSRRLGVARG TAQARLDKLI ARGVIDGFGP EVSPAAIGFG VTSFVTLEIS QRHGRDPVAA HLAAIPEVLE AHTITGSGDL LCRIVARSNA DLQRVIDQIV SHESIRRAST IIALAEQIPR RVLPLLRSAV QAGPPSTAAE EQGDSPGC
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