Gene Sare_4677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4677 
Symbol 
ID5704304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5299228 
End bp5300505 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content73% 
IMG OID641274075 
Productmajor facilitator transporter 
Protein accessionYP_001539421 
Protein GI159040168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.126838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.395619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCA CTGACTCCCG TCCCGTCACC TTCCGTGACG TCTTTACCGT CGCCGAATTC 
CGGGTGCTCT TCGGCAGCTA CAGCGTGTTC ATGATCGGTG AGACGGTGAA GATGCTCGCC
CTGTCCGTGC TGGTCTACGA GCGCACCGGC TCCGGGCTGC TCGCCGCGTT GGCCTACGTG
ACCGGGTTCC TGCCCCATGC GGTCGGTGGG GTGTTCCTGC TTGCCCTCGC CGACCGGTGG
CCGGCTCGGG GGCTCATCGT CGGGTACGAC CTCTTCCGGC TCGCCACGGT CGCGGTGCTC
GCGCTCGGCG TGCTCTCCCC GGTGGCCATG CTCGGCCTGG TCGCGGTCGT CGGCCTGTTC
GCTCCGGTCA GCAGCGCTGC CCGCAGCGCG CTGCTGCCGG AGATGCTGCA CGGCGACGCG
TACGTGCTGG GGCGGTCGGT GCTCACCGTT GCGGCGGGTG GCACCCAGGT GGCTGGGTTC
GCCCTCGGTG GCCTGCTGCT CGGGCTGGTC GGGCCGTACG GTGCCCTCTG GCTCACGGCA
GCCACGTGTC TTCTCTCCGC CCTGCTGGCC CGGGTTGGGC TGGCAGGGCG GGCGCCTCGG
GTGGGCGTGG CCGCCGGGAG CTCGGTCACC GGAAGCGTGG CTGCCGCAAG CTCGGTCACC
GGAAGCGCGA TCTCCGGAAA CGCCGTCGGG GAGACCTGGC GGGTCAACCG TGCGCTCCTC
GCCGACCGGC GGATACGCGG CCTGCTGCTG GCGCAGTGGA TTCCCGGTTC GCTGCTGGTC
GGGGCCGAGG GTGTCGCGGT GCCGTACGCG GCCGGGCTCG GCGCAGAGGC CAGCGCCGGC
GTCCTGTTGA TGGCCGCCGC GTTCGGGATG CTCATCGGCG ACCTGCTGGT TGGGCGGTTC
GTCGCGCCGG CCCGTCGGGA GGCGTTGACT CCGTGGCTGG CGCTGCTGCT CGGTGCGCCG
ATGTTGGCCT TCGTGGCCCG GCCCGGCCTG TGGTCCGCGG CGGCGCTCTT CACGGTCGCG
ACCGCCGGTT TCGCCTACCA GCTCGGGCTG GCCCGGCGCT TTCTCGACGC GGTGCCGGAG
TCCCGCCGCG GGCAGGCCTT CGGGTTGCTG GGCACCGGCC TGATGGCGGT GCAGGGGCTG
GCCGCCGCGG CCGGCGGGGC GCTGACCGAA CTGGTCGAGC CCGGCACCGT GATGGCTCTC
GCCGGGATGG CGTCGCTCGC TGCGACGGTG GCGCTCTGGC GGATCCTCAC GCCGCCGCCC
GGCCCGGAGC GGGGCTAG
 
Protein sequence
MTVTDSRPVT FRDVFTVAEF RVLFGSYSVF MIGETVKMLA LSVLVYERTG SGLLAALAYV 
TGFLPHAVGG VFLLALADRW PARGLIVGYD LFRLATVAVL ALGVLSPVAM LGLVAVVGLF
APVSSAARSA LLPEMLHGDA YVLGRSVLTV AAGGTQVAGF ALGGLLLGLV GPYGALWLTA
ATCLLSALLA RVGLAGRAPR VGVAAGSSVT GSVAAASSVT GSAISGNAVG ETWRVNRALL
ADRRIRGLLL AQWIPGSLLV GAEGVAVPYA AGLGAEASAG VLLMAAAFGM LIGDLLVGRF
VAPARREALT PWLALLLGAP MLAFVARPGL WSAAALFTVA TAGFAYQLGL ARRFLDAVPE
SRRGQAFGLL GTGLMAVQGL AAAAGGALTE LVEPGTVMAL AGMASLAATV ALWRILTPPP
GPERG