| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4575 |
|---|
| Symbol | |
|---|
| ID | 5705358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5193471 |
|---|
| End bp | 5194409 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641273986 |
|---|
| Product | PEP-utilising protein mobile region |
|---|
| Protein accession | YP_001539333 |
|---|
| Protein GI | 159040080 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.848155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000457261 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGATGGTC ACCGGCGTGC CGTCCGGTGT GGCGGCGGCA CGCGGGCGGG CGGCACGGGT
ACGCGCCACA CCGCGCAGAT CACGTCGGTC CGGCACTACG GTCAACGCCT CAACCAGACT
CACCCGCGAT CCGTCATCGC GGCGCGGCGG GCCGACCGCG CGGGCGAGCA GCAGCCCGTG
GCCGGGCTGC GGGACACGGC GGACCTGCTG CTGCCGTTCG GACGCGGCCC TCTCGCCCCG
GTCCGGCGTC GGGTCCTGGC CTGGGCGAGG CGATGGAGCG GGGTCCGCGA CGCCGCTCTG
CACTCGTTCA CCCGAGGCTG GCCGTTCATG CGGTCCGGCT ACCTGGAACT CGGCCGGCGC
CTGGCGGCTG AGGGCCTGCT GGCCACCGCA GACGACGTGT TCTACCTGAC CGGTGACGAG
CTGCACCGGT GGGTACACGA CGGAGTCGGG GACGCCGGCT GGTTCGAGGC CGTCCGGGTA
CGCCGTGCCC GTCGTCGGTG GCAGCAGCGG CTCACTCCGC CGGACGTGGT TCCCGCCGAC
GCCCGGGTCG TCATGTTCGG AGTCGATATC ACGGTGCTGG CGCTGTTCGG CGTGACGTCC
TCGTCTCCGG ACGGCGGCCT GAGCGGCTCG GCGGTCAGCC CCGGCACCTA CACCGGGCGG
GCCCGAGTCA TGCACGAGAT CTCCCAGGCG GGCGAACTGC AGCGGGGCGA GGTCCTCGTC
GTCCGGCACC TGACTCCGGC GTGGGCCCCG CTGCTCGCGC GCGTGGGCGC GGTCGTAGCC
GACGTGGGCG GCGCCCTGTC GCACGGGTCG GTGGTGGCCC GCGAGTACGG GGTGCCGGCG
GTGATGGGCA CCAAGGACGC GACAGCGCGG ATCTCTTCCG GGGACGTGAT CACCGTGGAC
GAAAGCGCCG GCATCGTCTG GGCGCCGTGC GAGAAGTGA
|
|---|
| Protein sequence | MDGHRRAVRC GGGTRAGGTG TRHTAQITSV RHYGQRLNQT HPRSVIAARR ADRAGEQQPV
AGLRDTADLL LPFGRGPLAP VRRRVLAWAR RWSGVRDAAL HSFTRGWPFM RSGYLELGRR
LAAEGLLATA DDVFYLTGDE LHRWVHDGVG DAGWFEAVRV RRARRRWQQR LTPPDVVPAD
ARVVMFGVDI TVLALFGVTS SSPDGGLSGS AVSPGTYTGR ARVMHEISQA GELQRGEVLV
VRHLTPAWAP LLARVGAVVA DVGGALSHGS VVAREYGVPA VMGTKDATAR ISSGDVITVD
ESAGIVWAPC EK
|
|---|
| |