Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4558 |
Symbol | |
ID | 5705416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5152562 |
End bp | 5153386 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273970 |
Product | transposase IS4 family protein |
Protein accession | YP_001539317 |
Protein GI | 159040064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.16009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0149064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGACG TGGTCGACCA AGACGCATGC CGTCTGCCCA AGGAGCTTCG TGCTGACCCA TCCTGCCACG ATCCCGCTGT CGACCCGAAG CCTGACGCAA CTGGCCGAAC TGCTGCGCGC GGAGCGCCTG CGCCGCGGTA CTCGTTACCG GCGCGCCTCG ATCCCGCCCG ACAGGCCCTG CTGGTGCTGG CCCACCTACG TAACGGCGAC ACCCCGGCCC GGCTGGCCGA CGGCTTCGGT GTCAGCCTGA CTACCGCATG GCGCTACATC CGCGAAGCGG TGGACCTGCT GGCCGCCACC GCACACACCC TGGCCGAGGC GATGACCAGC ATCGCTCGCC TGGCGTACGC CATCCTGGAC GGGACCCTGA TACCGATCGA CCGGGTCGCC AACCAGATGC CGTACTGCTC CGGGAAGCAC AGACGGCATG GAGTCAAAGC CCAGGTCATC GCCGACGCGG CCGGGCGGCT GCGGTGGCTG TCCGCGGCGC TGCCGGGCTC GACGCACGAC CTGAGCGTGC CCCGCGAGCA CGGCATCGTC GAGGCGCTGA CCACGGCGGA CGTCATGGCC TTCGCCGACA AGGGATATCA GGGCGCCGGT GGCAGCGTCC GCACCCCGTT CAAGCGATAC CGCCGCCGGC GTCGGCTGTC CCGCCGGGAG AAGGCGGTCA ACCGCGGCCA CGCCCGGATC CGAGCGGTCG GCGAACGCGC CATCGCCACC CTCAAGTGCT GGAAACTCCT AACCAAGGTG CACTGCTGCC CGAAACGAGT CACCGCGCTG CTCGCCGCGA TCCTCGTCCT TCAACTCGTC GAGGAGCAGC GCTGA
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Protein sequence | MEDVVDQDAC RLPKELRADP SCHDPAVDPK PDATGRTAAR GAPAPRYSLP ARLDPARQAL LVLAHLRNGD TPARLADGFG VSLTTAWRYI REAVDLLAAT AHTLAEAMTS IARLAYAILD GTLIPIDRVA NQMPYCSGKH RRHGVKAQVI ADAAGRLRWL SAALPGSTHD LSVPREHGIV EALTTADVMA FADKGYQGAG GSVRTPFKRY RRRRRLSRRE KAVNRGHARI RAVGERAIAT LKCWKLLTKV HCCPKRVTAL LAAILVLQLV EEQR
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