Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4282 |
Symbol | |
ID | 5706994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4857582 |
End bp | 4859261 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273701 |
Product | ABC transporter related |
Protein accession | YP_001539054 |
Protein GI | 159039801 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.184754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00727726 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGGTTACG TGGACGTGGC AGCCGTTGGG CATTCCCTGC CCGACGGGCG ACAGCTCTTC ACCGATGTGT CGTTCCGGGT CGCTGATGGC GCCAAGGTCG CCCTGGTCGG GCCGAACGGC GCGGGCAAGA CGACGCTGCT GCGGATGGTC GCCGGCGACC TGCCGGTGCA GCGCGGAGCG ATCGCCCGCG TCGGCGGGCT GGGCGTGATG CGTCAGTTCA TCGGGATGAT CGGCGACGAG TCGACCCTCG CTGACCTGGC GCTCTCCCTC GCCCCGCCGC GGCTGCGCGA GGCTGGTCAG CGGGTCGCCG CCACCGAGGC GGCCATGCGT CAGGCCGAGG TACGCGGCAA GTACAGCACC GCAGCCGGCA AGGCCCAGCT CGCGTACGCG GAGGCACTCG CCGCCTGGGG GGAGGCCGGC GGGTACGACG CCGAGGTGCT CTTCGACACC GTCACCACGA TCGTGCTCGA CCTGCCGTGG GACACGGCGC GGGGGCGACC GGTCCGGACG CTCTCCGGCG GCCAGCAGAA GCGCTTCGCC CTGGAACTCC TCCTCCGCGG TGTCGACGAG GTGTTGCTGC TCGACGAGCC GGACAACTTC CTCGACGTGA CCGGGAAGCG TTGGTTGGAG GCCCGGTTGC GGGAGTCCGG CAAGTCGGTG CTGTACGTCT CGCACGACCG GGAGTTGCTG GCCCACACCG CCGACCGGGT GGTGGCCGTC GAGGGCGGTG GTGCCTGGGT ACACCCGGGC GGCTTCGCCA GCTGGCACGA GGCCCGGGTC GCCCGGCACG ACCGCCTCGA CGAGCAGCGC CGGCGGTGGG ACGAGGAGCA CCAGAAGCTG CGCGAACTGA TGCTGATGTA CAAGCAGAAG GCCGCGTACA ACTCCGGTAT GGCCTCTCGC TACCAGGCCG CCCAGACCCG GTTGCGGAAG TTCGAGGAGG CCGGTCCGCC GCCCGTACCT CCGAAGGAAC AGGACATTCG GATGCAGCTG GCTGGTGGAC GGACCGGTAA GCGCGCGGTG ATCTGCGAGC AGGTGGAGCT CGACGGACTG ACCTACCCCT TCGACCTGGA GATCTGGTAC GGCGACCGGG TCGCCGTGCT GGGCGCCAAC GGGACCGGGA AGTCGCACTT CCTGCGCCTG ATCGCCGGGG GCGGAACCGA CCCCGATCCC GCGAATCGGC CGGTCGACGG CGGCGCGGGT CTCGCGCCGG TCGGACACGA CGGGGTGGCT CGACTGGGCG CCCGGGTCCG ACCAGGGCAC TTTTCCCAGA CCCACGACCG GCCGGAGCTG ATGGAGCGGA CGCTGGTCGA CATCCTCTGG CATGGCGACG ACCACCGGGC CGGGATGGAC CGGCACGCCG CGATGGCAGC GCTGTCCCGG TATGAGCTGG CCGGGCAGGG GGACCAGCGA TTCGGCACCC TCTCCGGCGG TCAGCAGGCC CGTTTCCTGG TGCTGTTGTT GGAGCTGTCC GGGGCGACCC TGCTGCTGCT GGACGAGCCG ACGGACAACC TCGACCTGGC CTCGGCGGAG GCGCTCGAGG CGGGTCTGGC CGCGTTCGAG GGGACGGTGG TGGCGGTGAC CCACGACCGA TGGTTCACCC GCTCGTTCGA CCGGTTCGTG CTGTTCCGAG GGGACGGCGA GGTGGTGGAG GTCGCTGAGC CCGTCTGGGA CGCGGCCTGA
|
Protein sequence | MGYVDVAAVG HSLPDGRQLF TDVSFRVADG AKVALVGPNG AGKTTLLRMV AGDLPVQRGA IARVGGLGVM RQFIGMIGDE STLADLALSL APPRLREAGQ RVAATEAAMR QAEVRGKYST AAGKAQLAYA EALAAWGEAG GYDAEVLFDT VTTIVLDLPW DTARGRPVRT LSGGQQKRFA LELLLRGVDE VLLLDEPDNF LDVTGKRWLE ARLRESGKSV LYVSHDRELL AHTADRVVAV EGGGAWVHPG GFASWHEARV ARHDRLDEQR RRWDEEHQKL RELMLMYKQK AAYNSGMASR YQAAQTRLRK FEEAGPPPVP PKEQDIRMQL AGGRTGKRAV ICEQVELDGL TYPFDLEIWY GDRVAVLGAN GTGKSHFLRL IAGGGTDPDP ANRPVDGGAG LAPVGHDGVA RLGARVRPGH FSQTHDRPEL MERTLVDILW HGDDHRAGMD RHAAMAALSR YELAGQGDQR FGTLSGGQQA RFLVLLLELS GATLLLLDEP TDNLDLASAE ALEAGLAAFE GTVVAVTHDR WFTRSFDRFV LFRGDGEVVE VAEPVWDAA
|
| |