Gene Sare_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4220 
Symbol 
ID5707958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4790476 
End bp4791390 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID641273639 
ProductNUDIX hydrolase 
Protein accessionYP_001538992 
Protein GI159039739 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.288399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCAGC GGCGGCGGAT GGCGGCGCAC GGGGTGCTGC GGGACGACGG CGGGCGGGTG 
CTGCTCGTCC GGGGGGCGGA CGAGTGCCCA TACCCGGGTG TCTGGCAGTT GCCGGGCGGC
AGGTTGTGGC ACGCCGAGCA TCCGGCCGCC GCGGCTGTCC GCGGATTCGG CGAGGCGACC
GGGCTGGCCG TGACAGCGAC CGACATCCGG GCGGCTGTCG CCGACCTGGT CACCCTCGAT
GCCGGAGTCG CCGTGCACAC CGACCGGATG GTGTTCGACG TGACGGCGGG AACGGGCGGT
GCGTTCCGGC CGGAGTCCGG CGGAGACAGT GATGAACTGG GGTGGTTCAC CCCCGGTTCG
GCGACGGCCG TGCCGGTGAT GCCGTTCACC GCGGAACTTC TCGGGCTGTC GGGCGCACCC
TTGCCGCTCG AGGTTCCCGG GGTGCTGCCG GCAGCCTGGA CCGTCCCGGT GCCGGCCGAC
CGACGGCACC GCTTCGGCGC GTATGGCCTG GTCACCGACC CGGCCGGACG GGTACTGCTG
ACGCTGATCG CGGATGGCTA TCCGGGTGCC GGTAGCTGGC ATCTGCCTGG TGGCGGCACC
GACCATGGTG AGGCGCCGGA GGCGGGATTG CTCCGCGAGC TGGTGGAGGA GTCCGCCCAG
GTCGGTCGAG TCGTCGAGCT GATCGGCGTG GACAGCCTCC ATGTTCCGCG GGCGATGGGG
CCGGAGGGGC GTCCACTGGA CTGGTATACC GTTCGGGTGA TCTATACGGT GGCGGTCGAT
GAACCGACCG AGGCGGTGGT GACGGAGCTG GCCGGAGGGT CGACCGCGCG GGCGAGCTGG
TTCACCGTCG CCGACCTCGC CGGGCTCCGG CTCAGCGATG TGGCCGGCCG GATGATCACC
GAGTGGATCG GCTGA
 
Protein sequence
MVQRRRMAAH GVLRDDGGRV LLVRGADECP YPGVWQLPGG RLWHAEHPAA AAVRGFGEAT 
GLAVTATDIR AAVADLVTLD AGVAVHTDRM VFDVTAGTGG AFRPESGGDS DELGWFTPGS
ATAVPVMPFT AELLGLSGAP LPLEVPGVLP AAWTVPVPAD RRHRFGAYGL VTDPAGRVLL
TLIADGYPGA GSWHLPGGGT DHGEAPEAGL LRELVEESAQ VGRVVELIGV DSLHVPRAMG
PEGRPLDWYT VRVIYTVAVD EPTEAVVTEL AGGSTARASW FTVADLAGLR LSDVAGRMIT
EWIG