| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4140 |
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| Symbol | |
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| ID | 5705585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4705945 |
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| End bp | 4707051 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641273568 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_001538921 |
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| Protein GI | 159039668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.867426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0592694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTGAACCGGC CCACGCCAGT CTCGACTCGG CTGCCCGAGT TCACCTGGGA CGCCCTGGAC
GCCGCGGCGG CCGTGGCCGC GGCGCATCCA GGGGGTCTGA TCAACCTCTC CATCGGTACC
CCGGTCGATC CGGTACCGCC GGTGATCCGG GAGTCGCTGG CTGACGCGTC GGATGCTCCC
GGGTACCCCC GGACCGCCGG CTCGCCGGCG CTGCGGGCCG CGATCGCGGC TTGGGCGGCG
CGAACCTGCG GGGCTGAACC GGATCGGCTC GGCGTGCTGC CAGCGGTCGG CTCGAAGGAG
TTGGTGGCCT GGTTGCCGAC GCTGCTGGGG ATCGGGCCGC AGGACGTGGT CGTGGTGCCG
TCAGTCGCGT ATCCGACCTA CGAGGATGGG GCCCGACTCG CCGGGGCGAC GGTCGTGCGG
GCCGATTCGC TGACCGCCGT TGGCCCGAAC CCCCGGGTCC GCCTGGTCTG GGTGAATTCG
CCGGGAAACC CGACGGGCCG GGTGCTGCCC GCCGCGCACC TGCGCAAGGT CGTCGACTGG
GCCCGCGAGC GCGGCGCAGT TGTCGCCAGC GACGAGTGCT ACCTGCCGTT GGGCTGGGAG
ACCGAGCCGG TCTCGGTGCT GTCGCCGCAG GTGTGCGGTG ATTCGTACGA TCGTGTGCTG
GCAGTGCACT CGCTGTCGAA ACGCTCCAAC CTCGCCGGGT ATCGGGCCGG CTTCGTGGCC
GGCGACCCGG CGCTCGTCGC CGAGTTGCTC AAGGTGCGCA AGCACGCCGG GATGATCGTC
CCGGCGCCGG TGCAGGCCGC GATGGTAACC GCCCTTCGGG ACGAGCAACA CGCCACGGAG
CAGCGGGAGC GCTACCGGAA CCGGCGTGCT GTGCTGCGTG CCGCGTTCAC CGCCGCCGGG
TTCACCGTCG AGCATTCGGA GGCCGGACTC TACCTGTGGC TGACCCGGGA CGAGGACTGC
TGGGCGACGG TCGACTGGCT GGCCCGGCGG GGGATCCTGG TGGCGGCGGG TGCCCTGTAC
GGGCCGGCCG GCGCTCGGCA TGTTCGTGTG GCGCTGACCG AGACCGACCA ACATGTGGCG
GCGGTCGCCG ACCGGTTGGC CGACTGA
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| Protein sequence | MNRPTPVSTR LPEFTWDALD AAAAVAAAHP GGLINLSIGT PVDPVPPVIR ESLADASDAP
GYPRTAGSPA LRAAIAAWAA RTCGAEPDRL GVLPAVGSKE LVAWLPTLLG IGPQDVVVVP
SVAYPTYEDG ARLAGATVVR ADSLTAVGPN PRVRLVWVNS PGNPTGRVLP AAHLRKVVDW
ARERGAVVAS DECYLPLGWE TEPVSVLSPQ VCGDSYDRVL AVHSLSKRSN LAGYRAGFVA
GDPALVAELL KVRKHAGMIV PAPVQAAMVT ALRDEQHATE QRERYRNRRA VLRAAFTAAG
FTVEHSEAGL YLWLTRDEDC WATVDWLARR GILVAAGALY GPAGARHVRV ALTETDQHVA
AVADRLAD
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