Gene Sare_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4015 
Symbol 
ID5707437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4568234 
End bp4569058 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content74% 
IMG OID641273440 
ProductATP synthase F1, delta subunit 
Protein accessionYP_001538796 
Protein GI159039543 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000505558 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGGCCG CCACCAGCCG GGAGTCGTAC CGGATCGCGG GTGACCGCCT CGACGCGTAC 
GTTCGCGGCG CGGAGCCGTC GGCGGTGGCC GCCACCGCCG ACGAGCTCCT CTCCGTCGCC
GACCTGATCC GGCGCGAGCC ACGGCTGCGC CGGGCGCTCG CCGACCCGGC CCGCTCCGGT
GCGGACCGGG CTGCCCTGCT CACCGGGATC CTCTCCGGCA AGGTCGGCGC GGACGCGCTC
GATCTGTCGA CCACGCTGGT CGCCGGTCGC TGGTCGGCCC CGTCGGAACT CCTCGATGGC
GCCGAGCGGC TCGGTGTGGC AGCGCTGTTG GCTGCCGCGG ACAAAGCGGG TGACCTCGGT
GAGGTCGAGG ACGAGCTGTT CCGCTTCGGT CAGGTCGTGG CCGGTCAGTC GGCGCTGTCC
AACGCGCTGT CGGACCCGGC GGCCCCGGTC GAGCAGCGGG CCACGCTCGC CGGTGAGCTA
CTCACCGGCA AGGCCCGTCC GGTCACCGTC CGGCTCGTCG AGGTGGCGCT GGGCGGGTTC
GGGGGACGCT CCTTCGTCGG GGCGCTCACC CGGCTGGTCG AACTCGCCGC CGACCGGCGG
GACCGGCAGG TGGCGTACGT GACCGTCGCA GCCCCATTGG GTGAGGAGGA GGAGCGTCGG
CTGGGCGCCA GCCTCTCCGC TATCTACGGT CGGGAGGTCT CCGTCAAGCA GTCGGTGGAC
CCCGAGGTCC TCGGTGGCGT CAGCGTCCGG GTCGGCTCCG ACCTGTACGA CGGCACCGTC
CTGCGCCGCC TCAACGAGAC CCGTAACGCG CTCGCGAAGC GCTGA
 
Protein sequence
MQAATSRESY RIAGDRLDAY VRGAEPSAVA ATADELLSVA DLIRREPRLR RALADPARSG 
ADRAALLTGI LSGKVGADAL DLSTTLVAGR WSAPSELLDG AERLGVAALL AAADKAGDLG
EVEDELFRFG QVVAGQSALS NALSDPAAPV EQRATLAGEL LTGKARPVTV RLVEVALGGF
GGRSFVGALT RLVELAADRR DRQVAYVTVA APLGEEEERR LGASLSAIYG REVSVKQSVD
PEVLGGVSVR VGSDLYDGTV LRRLNETRNA LAKR