| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3958 |
|---|
| Symbol | |
|---|
| ID | 5704909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 4498132 |
|---|
| End bp | 4499103 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273383 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001538739 |
|---|
| Protein GI | 159039486 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.068937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.125379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGTCCA ACCGGAAACG GCTGCCCGCC CTCGCGGTCG CAATGATGTC GGTCGTACTG
GTCGCCCCGG GCGTGCCCGC CCGAGCCGAC CCGTCTCCCG CCGAGTTGAC CCGGCGGATC
GAGAAGGCGT CCGCGGAGTT GGCACGCATC GTGGAGGCGT ACAACACCCT CGCCGAGGAC
CTCGAGGCGA ACCAGTCCGC CCTGGCCCGA CTGGCGGCCC GGCTCGGTCC GCTGGAGCGG
CAGGTCGAGC GAAGCCGGGC CGAGGTCAAC CAACTGGCCG TCACCGCGTA CAAGACCGGT
GACCTCGGTC CCGCGGCAGC GTTGCTACAT CCGGACGATG CCACGGTTCT GCTCGACCGA
CTCACCACCG TCGACCGACT GGCCCAGGAA CGGCGGAAGC GCATCACCGC CTTCGCCAAC
GACCAGCGGG AGCTCCTCGA GGAGCGGACC CGCCTGGATG CCGCCGTGGG GCAGGCGACG
GCGCGGGCCC GAGGGCTGAC CAGCACCCGC CAGCGCATCG AGCGTGACCT GGCCGAACTG
TACGAGTTGC GGCGGCGGGC GTACGGCCGG GCGACCGAAC GCCCTGCGGC CAGCCCGGAC
AGTACCCAGA AGGCACCGTC TGTGCCCGGC GCGGCCGGGG TGGCGGTGCG GTACGCGTAC
GGGGCGCTGG GCATGCCCTA CCGGTGGGGC GACGACGGCC GTACCGGATA TGACTGTTCG
GGCCTGACCT CGGCTGCCTG GCGAGCGGCC GGGAAGTCGC TGCCGCACAG CACCCGACGG
CAGTGGGGTG TGGTGGCTCG CATCGACCGC CACGACCTGA GCCCCGGCGA CCTGGTTTTC
TACCGAGGGC TCGGGCATGT GGCCCTCTAC GTCGGCGGCG GGCAGATCAT TGACGCTCCC
AACGCGGGGC GCAACGTCGT CAAACGCGAC ATGGACATTA TGTCGATCGT GGGATATGGC
CGGGTCCGCT GA
|
|---|
| Protein sequence | MSSNRKRLPA LAVAMMSVVL VAPGVPARAD PSPAELTRRI EKASAELARI VEAYNTLAED
LEANQSALAR LAARLGPLER QVERSRAEVN QLAVTAYKTG DLGPAAALLH PDDATVLLDR
LTTVDRLAQE RRKRITAFAN DQRELLEERT RLDAAVGQAT ARARGLTSTR QRIERDLAEL
YELRRRAYGR ATERPAASPD STQKAPSVPG AAGVAVRYAY GALGMPYRWG DDGRTGYDCS
GLTSAAWRAA GKSLPHSTRR QWGVVARIDR HDLSPGDLVF YRGLGHVALY VGGGQIIDAP
NAGRNVVKRD MDIMSIVGYG RVR
|
|---|
| |