Gene Sare_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3917 
Symbol 
ID5703768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4456276 
End bp4457952 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content66% 
IMG OID641273342 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001538699 
Protein GI159039446 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAGT ACATTTACGT CCTGGAAAAG GCGCGTAAGG CGCACGGCGA CAAGGTCGTG 
CTCGACAACG TGACGCTGAG CTTCCTGCCG GGGGCCAAGA TCGGTGTGGT CGGCCCGAAC
GGCGCCGGTA AGTCCAGCCT ACTGAAGATC ATGGCGGGTT TGGATCGGCC GAGCAACGGC
GAGGCCCGGC TGATGCCCGG CTATACGGTC GGCATGCTGG CGCAGGAGCC GCCGCTCAAC
GACGCGAAGA CGGTCCTCGG CAACGTCGAG GAGGCGGTCG CGGAGACCAA GGCCAAGCTG
GAACGTTTCA ACAAGATCGC TGAGCAGATG GCCACCGACT ACTCCGACGA ACTGATGGCG
GAGATGGGCC GTCTCCAGGA GGAGTTGGAC CACGCCGACG CGTGGGACAT CGACTCCAAG
CTCGAGCTGG CCATGGACGC GTTGCGCTGC CCACCGCCGG ACGCCGACGT GACCCAGCTC
TCCGGCGGCG AGCGGCGCCG GGTCGCGCTC TGCAAACTCC TGCTGGAAAC GCCCGACCTG
CTGTTGCTCG ACGAGCCCAC CAACCACCTC GACGCGGAGA GCGTGCAGTG GCTGGAGCAG
CACCTGGCCA AGTACGCCGG CACCGTCATC GCGATCACTC ACGACCGGTA CTTCCTGGAC
AACGTGGCCG GTTGGATCCT TGAGCTGGAC CGGGGGCGCG CCGTCGGCTA CGAGGGCAAC
TACTCGACCT ACCTGGAAAA GAAGGCGGCC CGGCTGGCCG TCGAGGGTCG TCGCGACGCC
AAGATGAAGA AGCGGCTCGC CGACGAGTTG GAATGGGTGC GCTCCAACGC CAAGGCACGG
CAGACCAAGT CCAAGGCCCG GCTCGACCGG TACGACGAGA TGGCCGCCGA GGCGGAGAAG
ACCCGCAAAC TGGACTTCGA GGAGATCCAG ATCCCGCCGG GCCCGCGCCT GGGCAGTGCC
GTGATCGAGG TGCAGCACCT GACCAAGGCA TTCGGTGACC GGGTGCTGAT CGATGACCTC
AGCTTTTCCC TGCCTCGCAA CGGCATCGTC GGCATCATCG GCCCGAACGG CGTCGGCAAG
ACCACCCTCT TCAAGACCAT CGTCGGGCTG GAGCAGCCGA CGGCGGGCAG CGTGAAGGTC
GGCGACACCG TCTCCCTGTC GTACGTCGAT CAGACCCGGG CGGGTCTCGC TGGGGACCGA
ACCGTCTGGG AGGTCGTCTC TGACGGCTTG GACCACCTGA TGGTGGGCAA GGTCGAGATG
CCGTCGCGGG CGTACATTGC TGCCTTCGGG TTCAAGGGGC CGGACCAGCA GAAGCCGACC
AAGGTCCTCT CCGGCGGCGA GCGCAACCGA CTCAACCTGG CGTTGACGCT CAAGATCGGT
GGCAACGTGA TCCTGCTGGA CGAGCCGACC AACGACCTGG ACGTGGAAAC CCTCTCCAGC
CTGGAGAACG CGTTGTTGGA CTTTCCTGGC TGCGCCGTGG TCATCTCCCA CGACCGGATG
TTCCTGGACC GAGTCGCCAC GCACATCCTG GCCTGGGAGG GCGACGACGA GGACCCGGCG
AAGTGGTTCT GGTTCGAGGG CAACTTCGAA GCATACGAAA AGAACAAGAT CGATCGCCTG
GGTGTCGAGG CCGCCCGGCC GCACCGGGTC ACCTACCGCA AACTCACCCG AGACTGA
 
Protein sequence
MAQYIYVLEK ARKAHGDKVV LDNVTLSFLP GAKIGVVGPN GAGKSSLLKI MAGLDRPSNG 
EARLMPGYTV GMLAQEPPLN DAKTVLGNVE EAVAETKAKL ERFNKIAEQM ATDYSDELMA
EMGRLQEELD HADAWDIDSK LELAMDALRC PPPDADVTQL SGGERRRVAL CKLLLETPDL
LLLDEPTNHL DAESVQWLEQ HLAKYAGTVI AITHDRYFLD NVAGWILELD RGRAVGYEGN
YSTYLEKKAA RLAVEGRRDA KMKKRLADEL EWVRSNAKAR QTKSKARLDR YDEMAAEAEK
TRKLDFEEIQ IPPGPRLGSA VIEVQHLTKA FGDRVLIDDL SFSLPRNGIV GIIGPNGVGK
TTLFKTIVGL EQPTAGSVKV GDTVSLSYVD QTRAGLAGDR TVWEVVSDGL DHLMVGKVEM
PSRAYIAAFG FKGPDQQKPT KVLSGGERNR LNLALTLKIG GNVILLDEPT NDLDVETLSS
LENALLDFPG CAVVISHDRM FLDRVATHIL AWEGDDEDPA KWFWFEGNFE AYEKNKIDRL
GVEAARPHRV TYRKLTRD