Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3909 |
Symbol | |
ID | 5704982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4449509 |
End bp | 4450348 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273334 |
Product | peptidase C60 sortase A and B |
Protein accession | YP_001538691 |
Protein GI | 159039438 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.985373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAG CACACAGGCG TACTCGGCAG CAAGCCGTCC GGGCGGGCAC CCGGAGGGCG GTGTCGGCCG TTGCCCGGCT GGCCGCCGTG ACCGCCCGCC GGCTGGGTAG GGCCGCCGGG CAGGCCTCCG CCGCCAGCGT CGTCACCACC GACCCGGCCA CCGGACCGCT GCCAGCGCGT CCGCGCCAAC GTTGGGTGCG GGCTGGGCGG CGGCTGACGC TCCCCCGGAG CCCCGGCGTA CCCGTGCTGG TCATCGGAAC CCTGATGATG CTGATCATCG CCATGCTGGG CGTGGAGCGG GCGACCGGCG TGAGCGTACT CCCGGAACGG TTCACCGCCG GCTTGCGACC GCCGCCGAAC AGGTTCCCGG TACTGCCGGC GAGCGATCCG GTCGCCGTCG AGATCGACGC CATTGACGTC ACGGCCCCGG TGCACAACGT GGGGCTGGCG CCGGATGGCA CCATCGCCGC GCCGGATGCG GCTCGCGCCC AGGAGGCGGG CTGGTACGAC CAGGGCCCCA CCCCCGGGCA GTACGGTCCG GCGGTTCTCG TCGGGCACGT GGACACCAGC ACCGGGCCGG CGGTCTTCCA GGGGCTGCGT GACCTCCGCG CTGGCGACCG GGTCGAGGTG GACCGGACCG ATGGGCGGGT CGCGGTCTTC GAGGTCAATT CGGTGGAGCG GTTCGACAAG GAACGCTTCC CGGCCGATCA GGTATTCGGG GACTTTGATC GACCGAACCT GCGGCTGGTG ACCTGCGGCG GCCGGTGGGT CGGCGGAGAT ACCGGCTACG CCGACAACGT GGTGGTCTTC GCCTCCCTCG TCGAGGCGCG TGACCGCTGA
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Protein sequence | MARAHRRTRQ QAVRAGTRRA VSAVARLAAV TARRLGRAAG QASAASVVTT DPATGPLPAR PRQRWVRAGR RLTLPRSPGV PVLVIGTLMM LIIAMLGVER ATGVSVLPER FTAGLRPPPN RFPVLPASDP VAVEIDAIDV TAPVHNVGLA PDGTIAAPDA ARAQEAGWYD QGPTPGQYGP AVLVGHVDTS TGPAVFQGLR DLRAGDRVEV DRTDGRVAVF EVNSVERFDK ERFPADQVFG DFDRPNLRLV TCGGRWVGGD TGYADNVVVF ASLVEARDR
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