Gene Sare_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3909 
Symbol 
ID5704982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4449509 
End bp4450348 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID641273334 
Productpeptidase C60 sortase A and B 
Protein accessionYP_001538691 
Protein GI159039438 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.985373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAG CACACAGGCG TACTCGGCAG CAAGCCGTCC GGGCGGGCAC CCGGAGGGCG 
GTGTCGGCCG TTGCCCGGCT GGCCGCCGTG ACCGCCCGCC GGCTGGGTAG GGCCGCCGGG
CAGGCCTCCG CCGCCAGCGT CGTCACCACC GACCCGGCCA CCGGACCGCT GCCAGCGCGT
CCGCGCCAAC GTTGGGTGCG GGCTGGGCGG CGGCTGACGC TCCCCCGGAG CCCCGGCGTA
CCCGTGCTGG TCATCGGAAC CCTGATGATG CTGATCATCG CCATGCTGGG CGTGGAGCGG
GCGACCGGCG TGAGCGTACT CCCGGAACGG TTCACCGCCG GCTTGCGACC GCCGCCGAAC
AGGTTCCCGG TACTGCCGGC GAGCGATCCG GTCGCCGTCG AGATCGACGC CATTGACGTC
ACGGCCCCGG TGCACAACGT GGGGCTGGCG CCGGATGGCA CCATCGCCGC GCCGGATGCG
GCTCGCGCCC AGGAGGCGGG CTGGTACGAC CAGGGCCCCA CCCCCGGGCA GTACGGTCCG
GCGGTTCTCG TCGGGCACGT GGACACCAGC ACCGGGCCGG CGGTCTTCCA GGGGCTGCGT
GACCTCCGCG CTGGCGACCG GGTCGAGGTG GACCGGACCG ATGGGCGGGT CGCGGTCTTC
GAGGTCAATT CGGTGGAGCG GTTCGACAAG GAACGCTTCC CGGCCGATCA GGTATTCGGG
GACTTTGATC GACCGAACCT GCGGCTGGTG ACCTGCGGCG GCCGGTGGGT CGGCGGAGAT
ACCGGCTACG CCGACAACGT GGTGGTCTTC GCCTCCCTCG TCGAGGCGCG TGACCGCTGA
 
Protein sequence
MARAHRRTRQ QAVRAGTRRA VSAVARLAAV TARRLGRAAG QASAASVVTT DPATGPLPAR 
PRQRWVRAGR RLTLPRSPGV PVLVIGTLMM LIIAMLGVER ATGVSVLPER FTAGLRPPPN
RFPVLPASDP VAVEIDAIDV TAPVHNVGLA PDGTIAAPDA ARAQEAGWYD QGPTPGQYGP
AVLVGHVDTS TGPAVFQGLR DLRAGDRVEV DRTDGRVAVF EVNSVERFDK ERFPADQVFG
DFDRPNLRLV TCGGRWVGGD TGYADNVVVF ASLVEARDR