Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3846 |
Symbol | |
ID | 5707924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4377833 |
End bp | 4378813 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273268 |
Product | DNA polymerase III, delta subunit |
Protein accession | YP_001538630 |
Protein GI | 159039377 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00271711 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCGGCG TGACCGCCGT CAGCCTTCCT CCCATTGTGC TCGTCCTCGG CGACGAGGAA CTACTCGCCA CACGCGCGGT CACCGAGGCG GTTGCCCGCG CACGGAGCGC GGATCCGGAT GTGGACGTCC GTGAGTATCA GGCCGGCTCG CTTACCGTCG GCGAGATCGC GGAGATGCTG AGTCCATCCC TCTTCGGCGG GCGACGGTTG CTGATCCTGC GATCCGGCCA GGACGCGCGC AAGGACTTGA CGGCCGCGCT ACTCGGATAC GTGAAGAACC CTGACCCCGA CGTGCAACTG GTCGTACTCC ACCTCGGTGC GGCCAAGGGC AAGGCGTTCG CCGACGGGCT GAAAGCGGCC GGCGCGACCG TCATACCGGC TGCCCGGCTC AGGGGGCACC GGGAGCGGGT AGCGTTCGTC CGCGAGGAGA TTCGGCGTGC GGGTGGCCGG TGCGCCGACG CCGCCGCCGA GGCACTCATC GCCGCGGTCG GCAACGACCT GCGCGAGCTC GCTGCCGCCT GCTCGCAGCT GATGGCCGAC AACGACGGAA GGATCAGCCC GGAAACGGTC TCCCGCTACT ACCGGGGCCG GGTCGAGGTG TCCGGTTTTA CCGTCGCCGA TGCGACGATG GTGGGCGATG TGCCGGCTGC GCTGGAGGCG CTGCGCTGGG CGCTGCACGT CGGTGTTGAT CCGGTGCCGA TAGCGGACGC GCTTGCTGAC GGCGTACGCA CCGTGGCCAG GGTCGCCTCC GCCGGACGGG GCAGCCCCTA CCAGTTGGCC AGTACGCTCG GTATGCCGGC CTGGAAGATC GAACGGGCGC AGCGGCAGAG CCGCGGCTGG ACACCGGAAG GCCTGGTGCG GGCCATGCGG GTCGCCGCCG AGTGTAACGC CGCGGTGAAG GGCGGCTCGG ACGACCGGGC GTACGCCTTG GAGCGGGCCG TCTTCTCCGT GGCCGCGGCT CGGCAGGGCG GCGCCCGGTG A
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Protein sequence | MGGVTAVSLP PIVLVLGDEE LLATRAVTEA VARARSADPD VDVREYQAGS LTVGEIAEML SPSLFGGRRL LILRSGQDAR KDLTAALLGY VKNPDPDVQL VVLHLGAAKG KAFADGLKAA GATVIPAARL RGHRERVAFV REEIRRAGGR CADAAAEALI AAVGNDLREL AAACSQLMAD NDGRISPETV SRYYRGRVEV SGFTVADATM VGDVPAALEA LRWALHVGVD PVPIADALAD GVRTVARVAS AGRGSPYQLA STLGMPAWKI ERAQRQSRGW TPEGLVRAMR VAAECNAAVK GGSDDRAYAL ERAVFSVAAA RQGGAR
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