Gene Sare_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3846 
Symbol 
ID5707924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4377833 
End bp4378813 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID641273268 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001538630 
Protein GI159039377 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00271711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGGCG TGACCGCCGT CAGCCTTCCT CCCATTGTGC TCGTCCTCGG CGACGAGGAA 
CTACTCGCCA CACGCGCGGT CACCGAGGCG GTTGCCCGCG CACGGAGCGC GGATCCGGAT
GTGGACGTCC GTGAGTATCA GGCCGGCTCG CTTACCGTCG GCGAGATCGC GGAGATGCTG
AGTCCATCCC TCTTCGGCGG GCGACGGTTG CTGATCCTGC GATCCGGCCA GGACGCGCGC
AAGGACTTGA CGGCCGCGCT ACTCGGATAC GTGAAGAACC CTGACCCCGA CGTGCAACTG
GTCGTACTCC ACCTCGGTGC GGCCAAGGGC AAGGCGTTCG CCGACGGGCT GAAAGCGGCC
GGCGCGACCG TCATACCGGC TGCCCGGCTC AGGGGGCACC GGGAGCGGGT AGCGTTCGTC
CGCGAGGAGA TTCGGCGTGC GGGTGGCCGG TGCGCCGACG CCGCCGCCGA GGCACTCATC
GCCGCGGTCG GCAACGACCT GCGCGAGCTC GCTGCCGCCT GCTCGCAGCT GATGGCCGAC
AACGACGGAA GGATCAGCCC GGAAACGGTC TCCCGCTACT ACCGGGGCCG GGTCGAGGTG
TCCGGTTTTA CCGTCGCCGA TGCGACGATG GTGGGCGATG TGCCGGCTGC GCTGGAGGCG
CTGCGCTGGG CGCTGCACGT CGGTGTTGAT CCGGTGCCGA TAGCGGACGC GCTTGCTGAC
GGCGTACGCA CCGTGGCCAG GGTCGCCTCC GCCGGACGGG GCAGCCCCTA CCAGTTGGCC
AGTACGCTCG GTATGCCGGC CTGGAAGATC GAACGGGCGC AGCGGCAGAG CCGCGGCTGG
ACACCGGAAG GCCTGGTGCG GGCCATGCGG GTCGCCGCCG AGTGTAACGC CGCGGTGAAG
GGCGGCTCGG ACGACCGGGC GTACGCCTTG GAGCGGGCCG TCTTCTCCGT GGCCGCGGCT
CGGCAGGGCG GCGCCCGGTG A
 
Protein sequence
MGGVTAVSLP PIVLVLGDEE LLATRAVTEA VARARSADPD VDVREYQAGS LTVGEIAEML 
SPSLFGGRRL LILRSGQDAR KDLTAALLGY VKNPDPDVQL VVLHLGAAKG KAFADGLKAA
GATVIPAARL RGHRERVAFV REEIRRAGGR CADAAAEALI AAVGNDLREL AAACSQLMAD
NDGRISPETV SRYYRGRVEV SGFTVADATM VGDVPAALEA LRWALHVGVD PVPIADALAD
GVRTVARVAS AGRGSPYQLA STLGMPAWKI ERAQRQSRGW TPEGLVRAMR VAAECNAAVK
GGSDDRAYAL ERAVFSVAAA RQGGAR