Gene Sare_3607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3607 
Symbol 
ID5706632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp4163427 
End bp4164116 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID641273031 
Producthypothetical protein 
Protein accessionYP_001538396 
Protein GI159039143 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.39281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.000432475 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCAGG AGGGTGAGGA ACCGGAGCAC CGGTTTCGAC AGGACAGTGA GATGTCCCGG 
GACACGGCCC GGGTGGAGGC GTTCAGCGAC GCCGTGATCG CCGTCGCGCT GACCCTGATG 
GCGGTGGAAC TGCTTCAGTT CGGCCGGACC GAGGCACCCG ACGAGGACCT GGTATCAAAG 
CTCGAGAACG AGTGGCGGGC CTTCCTCGCC TACGTCATCA CGTTCGCCAT CGTCGGCCAG 
ATCTGGCTGA CCCACCACAA CAGTTGGCGG TACGTGATCC GGGTCGACCA GATGCTGTTG 
GTGCTGAACC TGGTGATGCT GATGTTCGTG GCGGCAATCC CGTTCACGGC CAACCAACTG 
TCGGACCACC TTCGGGGCAG CGCCGTGGAC CAGCAGATAT CGGCTGCGAT CTACGTCGGT 
GCCGTGCTCG GCGAAGCGCT CTTCTTCAAC CTGGCCTGGT GGTGGGCGCG CTGGCGTGGC 
CTGCTCACCC CGGATCTCGA TCCCCGGCTG GCGGAGTTGG TGTCCCGCCG GTATCTCCTC 
CGTCCGTTGC TCTACCTGGG CGCCTTCGCC ATCGTCTTCA TCAATCCGAT CCTCAGCCTG 
CTGGCCTACC TCCTGCTGGT GGCGATCTAC CTCATCCGCG GCCCTGGCGA CCTGCCGCCC 
GGCGGGCAGG CGGAGGCCGA GTCGCGGTGA
 
Protein sequence
MTQEGEEPEH RFRQDSEMSR DTARVEAFSD AVIAVALTLM AVELLQFGRT EAPDEDLVSK 
LENEWRAFLA YVITFAIVGQ IWLTHHNSWR YVIRVDQMLL VLNLVMLMFV AAIPFTANQL 
SDHLRGSAVD QQISAAIYVG AVLGEALFFN LAWWWARWRG LLTPDLDPRL AELVSRRYLL 
RPLLYLGAFA IVFINPILSL LAYLLLVAIY LIRGPGDLPP GGQAEAESR