| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3553 |
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| Symbol | |
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| ID | 5705046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4099288 |
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| End bp | 4101042 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272980 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001538346 |
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| Protein GI | 159039093 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.279116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0486648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAC GGATGTCGAC CCTGCTGCTG CGGACCCTCC GTGAGGACCC AGCAGACGCA
GAGGTACCGA GCCACCGGCT GCTCCTGCGC GCCGGCTACC TCCGCCGCGC CGCTCCCGGT
GGGTACACCT GGCTGCCGCT GGGCAAGCTC GTGCTCGACC GGGTGGCCGA GGTGATCCGG
ACCGAGATGC TCGCGATCGG TGACCAGGAG GTGCACTTCC CGGCGCTGCT GCCGGCCGAG
CCGTACCGGA CCAGCGGGCG GTGGACGGAG TACGGCGACG ACCTCATCAC CCTCGTCGAC
CGAAGGGGCG CCGAGCACCT GCTCGCCCCG ACCCACGAGG AGCCGGCGGC CCTGCTGGTC
AAGGAGCTGT TCACCTCGTA CCGGGACTTC CCCGTAGGGA TCTTCCAGAT ACAGACAAAG
TTCCGCGACG AGGCACGGCC CCGGGCCGGT CTGTTGCGTG GGCGCGAGTT CCTGATGAAG
GACGCGTACT CCTTCGACCT GGACGAGGCG GGTCTCCAGG CCGCCTACGA CCGACACCGG
AGCGCGTACC AAAAGATCTT CGCGCGGCTC GGCCTGGACT ACGCGGTCGT GCACGCCGTT
TCCGGGGCGA TGGGCGGTTC GGCTTCGGAG GAGTTCCTGG CCACGTCCAA GATCGGCGAG
GACGTCTACG TCGGCTGCAC CGCGTGCGAC CACACCGCGA ACACCGAGGC CGTGACCACA
CTCGCCCCGC CGGCCTCGAA CCCGGAGGAA CGGCCGGCGA CTCAGGTGCA CGACACCCCG
GACACACCGA CGATCGCCAG CCTGGTCGGC CTCGCCAACG CCCGTGCGCT GGCCGGCCGG
GACGACTGGG CCGCCGGCGA CACCCTGAAG AATGTCGTCC TCACGATCCG CCCGCCCGGC
GCGGCGAAGT CCGAGCTCCT GGTCATCGGT CTTCCCGGTG ACCGGGAGGT TGATCTCAAG
CGGGTCGCGG CGACACTCGC CCCGGCGACC GTCACCGTGT TCGACGGCTG GGCCGACCAC
CCCGAGTTGG TCCGTGGCTA CCTCGGGCCG CAGGTCATGG CCAAGCTCGG TGTCCGTTAC
CTGGTCGACC CCCGGGTGGT GCCCGGCACC GCCTGGCTGA CCGGCGCGAA CGAGCCCGGA
CGGCACGCGA CGAACGTCGT CTGCGGTCGA GACTTCCTGC CCGACGGCAC GATCGAGGCC
GCCGAGGTCC GTCCCGGCGA TCCCTGCCCG GCCTGCCGCA CCGGGCAGCT CACCCTACGT
CGGGGCATCG AGATCGGGCA CATCTTCCAG CTCGGTCGCC GCTACACCGA CGCGTTCACC
GTGGACGTGC TCGGCCCGGA GGGCCAGTCG GTCCGACCCA CGATGGGCTG CTACGGCATC
GGTGTGTCCC GGGCGGTCGC GGTGATCGCC GAGCAGCACC ACGACGAGCG GGGCCTCGTC
TGGCCGACCG AGGTCGCGCC ATGCGACGTA CACCTGGTGG CGGCCGGTAG GGGACCGCAG
GTGGAGACAG CACTCGGCCT CGGCAACCGT CTCGCCGAGG CCGGCCTACG GGTGCTGGTG
GACGACCGAG GGCACGTCTC CGCCGGGGTG AAGTTCACCG ACGCGGAACT GGTCGGCATT
CCCCGGACGG TCGTGGTCGG CCGCCGGCTC GCCGACGGGT ACGCCGAGGT GCGTGACCGG
CCCTCCGGCA AGCGTGCCGA CGTGCGGGTG GACGCCCTCG TCGAACACCT GGTCAACGAG
GTCCATAGCG GGTAG
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| Protein sequence | MLLRMSTLLL RTLREDPADA EVPSHRLLLR AGYLRRAAPG GYTWLPLGKL VLDRVAEVIR
TEMLAIGDQE VHFPALLPAE PYRTSGRWTE YGDDLITLVD RRGAEHLLAP THEEPAALLV
KELFTSYRDF PVGIFQIQTK FRDEARPRAG LLRGREFLMK DAYSFDLDEA GLQAAYDRHR
SAYQKIFARL GLDYAVVHAV SGAMGGSASE EFLATSKIGE DVYVGCTACD HTANTEAVTT
LAPPASNPEE RPATQVHDTP DTPTIASLVG LANARALAGR DDWAAGDTLK NVVLTIRPPG
AAKSELLVIG LPGDREVDLK RVAATLAPAT VTVFDGWADH PELVRGYLGP QVMAKLGVRY
LVDPRVVPGT AWLTGANEPG RHATNVVCGR DFLPDGTIEA AEVRPGDPCP ACRTGQLTLR
RGIEIGHIFQ LGRRYTDAFT VDVLGPEGQS VRPTMGCYGI GVSRAVAVIA EQHHDERGLV
WPTEVAPCDV HLVAAGRGPQ VETALGLGNR LAEAGLRVLV DDRGHVSAGV KFTDAELVGI
PRTVVVGRRL ADGYAEVRDR PSGKRADVRV DALVEHLVNE VHSG
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