| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3546 |
|---|
| Symbol | |
|---|
| ID | 5703927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 4090257 |
|---|
| End bp | 4091030 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641272973 |
|---|
| Product | cobalamin-5-phosphate synthase CobS |
|---|
| Protein accession | YP_001538339 |
|---|
| Protein GI | 159039086 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0872247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00291671 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGCTG AGGGGCGGCT CGCCGCCGGG GCCCGGCTGG CGCTGACCAC CTTCACGACG
GTGCCGGTGC GCGCGGGCCG GATCGACCGT GCCGTGGCGG GCACCGCGAT GGCTCTTGCC
CCGGCCGTCG GCGCGCTGCT CGGCGCCGTA CTCGCCGGAG TGCTGCTTGT CACCGGGGGG
TTCGCACCAC CGCTGGTGGC AGCCGGCGTC ACGGTCGGCA CCAGCGCGTT GCTGACCCGG
GGGCTGCACC TCGACGGGCT CGCCGACACC GTGGACGCGC TTGGCTCATA CCGACGAGGC
CCCGCCGCGC TGGAGATCAT GAAGAAGCCG GACGTCGGTC CGTTCGGGGT GACCGCGCTG
GTGGTCGTAC TCCTGGTGCA GGCGGCGGTG CTCGCGGAGT TGGCCGAGCG CTCGGCGCTG
GCCACGCTGG CGGCGGTGGT GACGGCCACC GCCACTGGCC GGCTCGGGGT CGGGGTGGCC
TGCCGGCGCG GGCTGCCGGC AGCGCGGCCG GACGGGCTGG GAGCCCTCGT TGCCGGCACC
GTCGGGCCGC CCGCGCTGGC CGCCGGGACC GTTGCCGTTG CGCTGCTGGC GTTCGCCGCC
GTGCCGGACC GCCCGTGGCA GGGTCCACTC GTCGTCGCCG CCGCCCTCGC CACCGCCGTC
TGGCTGCTCC GACACGTGGT ACGCCGTCTC GGCGGTATCA CCGGCGATGT TCTCGGCGCT
ACCGTCGAAG TGGTCACCAC CCTGGTCTAC CTGGGACTGG TGTTGTCCGG CTGA
|
|---|
| Protein sequence | MPAEGRLAAG ARLALTTFTT VPVRAGRIDR AVAGTAMALA PAVGALLGAV LAGVLLVTGG
FAPPLVAAGV TVGTSALLTR GLHLDGLADT VDALGSYRRG PAALEIMKKP DVGPFGVTAL
VVVLLVQAAV LAELAERSAL ATLAAVVTAT ATGRLGVGVA CRRGLPAARP DGLGALVAGT
VGPPALAAGT VAVALLAFAA VPDRPWQGPL VVAAALATAV WLLRHVVRRL GGITGDVLGA
TVEVVTTLVY LGLVLSG
|
|---|
| |