| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3541 |
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| Symbol | |
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| ID | 5703922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4082516 |
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| End bp | 4085947 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641272968 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001538334 |
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| Protein GI | 159039081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.604889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00807963 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCG GCTACGGTGA CCGATGGCAT CATGCCGCCG AGCCGCCCTG GATGTTCGAG
CCGACCAACG AGTGGCGTCC CCAGTTCCCC GGCCAACGCT ACCCCGGCGA CATCGATATC
GAGCACACCC CACGACCCGC CCCGCGCGGG CGGGCTGCCG TCGTCGGCCG AGCCGAGATA
CCCCCGCTCG CGCCGACCCG CCCCGACGGG ACCTACGTCG GCCGGTCCTG GGACGAACAG
GACGACCGCC GCACACGTCA CGACGACGAG ACATACCGGC GTCCCCACGA CGAGGCGTAC
CGCCGGGGCG AGCTGCCCCG GGTAGACGAC CGGGGCCGGC GACCGGAGCC GCTCAACGCC
CGCGGCGGCG AGCCCCACTG GGAACGGGGC AACCGGGACG AGACCGGGCG CGGTCGTTAC
GCCGACCACG GCCGGTACGA CGACCGGCGC CCACGGCACG AGCCCGGCGG GCGGGATCAG
CCGGTCTCCC CCGCCCGGCA CCCGGAACCG GGCTGGCTAC CCGAACCGGA CGAGGAACTG
CCCCGGGGGC ATGACCACTA CGCCTTCGGC CGAGATGCCG GGGAGCCGCC GCCCGGGACG
CGCTACCCGT GGGGGCGGCC CGGCGGCCCG GATCGTGGAC GACCCGGTGA GCCGCCCCTC
AGCGATGACG GCCGCTCGAA GCCGGACTGG AGCGGGGCGA CGCGCGACGG GGACGTCAAC
CCGTACCCGC GACGGCATCC GGCCGGCCCC GGCCACCCCG CCGGGCGCGA TGCGCCCAGC
CCGCACCGGG ACGCGGCGCC CGGACCGGGC CGCCACCCCG GCCGGTACGC GGCCCAGCCG
CCAAACCCCA ACCGGCGACC GGACACGGCC GCACCCTGGC CACCACCCGG CCCACCCCGG
CCGGGTCCGG ACCAGCCTGC CCCCCAGCGC GGAAGACCGC ATGGGCCACC CCTCCCGCCG
CCCAGCCGAT CACGTCAGGG CGGACTTCCG ACCGACACGC CGAGAGCCCC GTATGGCCGC
CCGGTGTCCG GCACGCCGAA CGGACCAACG TCCGGCGCGC CCAGCCGACC GGCATCCGGC
ACCACCGGGA CGCCTCCGCC GCCCCGCCCG CCCCAGGGCC ACCCAGGGGA CGACGTACCC
CGGCGGCCAC CGCCTCCGGT TCCGGGGATG GCTGGCCCAC CGCCGGTCCG GCCGGTCTCA
CCGGCGGCGG GGAACCACCG GGACCGGACG GACCAGGCGC GGACGGACAC CGGAGCCGAT
CGGGAGACCG GGTCGCCGCC AGGCACCGCG CCATGGCAGC CACGACGGTA CGTTCCGCCG
CCAGCCTCAC CGCCACTCAC CACCGAACCC GCGCCCGCCG CGGGACCTCC GCCAGGTCGA
AATGGGCCGG GCGCCTGGTT CGGACCGGCC GTATCGCCCT CCAAGGCAGC ACCATCCGAC
CCTGCCGCGC CGTCGCCGAC CGCCGCATCC GACCGGTCGG TCGAGGGGTC GGATGCCACA
TCACCACCGC CCCCAGCAGC ACCCGCTGGC GCCTCCACGG ACACGGCACC AGGCCGCGCC
ACCGCCGACA CGGAACCAAC CGAGACCGCA CCGGCCGCCG TCGCCGACAC CACCAACGAC
ACGGAGCCAA CCGACACCGC CGAGGACACG GAACCAGGCC GCGCCACCGC GAACACGGAA
CCAACCGACA CCGCCGCGAA CACGCAACCA GGCCGCGCCG CACCGGCCGC CGTCGCCGAC
ACCACCAACG ACACGGAACC AACCGACACC GCCGCGAACA CGCAACCAGG CCATGCCGCA
CCGGCCGCCG TCATCGGCAG CGACGACATC GTGGACGACC GCCCCACGCC GGTTGACGAC
GATGCCCTCA CGGAAAGTTC GGACTCGACA CACGCCGACG CCGACGCCGA ATCAGCGCCG
GAAGGCGCGC AGGTTCCCGT CGAGCCCGCG CCACCGCTCA CACCGTCACC CAGCGCGGAG
TCGATCCAGG TGATCTCGGC GCCGCCCGCG CCACAGCCGG AGGGCGACCC GGCCGAGACG
CCGAAGGCGG CGGCACCGCC GTCGGAGGCG CCGGCACCGG TTGCGGCAGC GACTCCCACC
GCCCGCCACG ACATGCCGCC GGCTGGCGAC ACGGCCCCAG CAGACCCTGA GCGCGTGCTG
GCCAACCATC CCTGGCGGCT GGACCCGACC ACGCTCCGCG AGGTCGTCAC GGACCCGGAG
CAGTTCCGGG GTCTCCGGCA CCGCCTCACC GAGAAACTCG ACACGGCCAT CGACAACCGG
TCCCGAGCCC GGCTACTCAG CCTGCGGGCG GTGGTGTCCC GGGCGGCTGG CGACCTGGAC
GACGCCCTGG CAGACGGCCG GCTGGCCCTG ACCTACGCGG AGGCCACCGG CGAGTTACGA
CGGTCCGCTC TCGCGCAGGC CCGGCTGGCA CACGTGCTGC GGTGGCGGGG CGAGTATGAC
GAGGCCGACC GGCTCTTCGC GCAGGCGAAC TCACCGGAGC TACCCGACCG GCTACGGGCG
GCGTTGCACG AGCACGCCGG ACGATGCTGC GTCGACCAGG GCCGGCTGGT CGAGGCGTGC
GTTCACTTCG AACGTGCTCT GGACCTACGC GGTACCGCCG ACCCGACGTT GCTGGACCGG
GTGCGGGTGA GTCTGGACGC AGTCGCCGAT CGGGCCGCCG CGACCGGGTT CGGGCCGTAT
CCCCGTAGCA GGGCGGAGGT ACTGGAGCCG GAACGACCGC CGGTGCCGGC ACGCGACGGC
AGCCTCTGGG GGTACGCCGA CCCGAACGGA GACCTGGTCG TCGCGGCGGA GTATGCGGAG
GTGCAGCCGT TCCAGGAGGG CTTGGCCTGG GCTCGCCGGC CGGACGACCA GCGGTGGTCG
TTGCTCGACC GGACCGGCAC CACCGTGTTG GCGGCGTCCT GGCTGGAAGC CGGTCCGTTC
GCCGATGGGC TGGCCTGGGT GTCACAGGGC GAGCCCGGCG GCTGGTGTGC AATCGACCCG
CGCGGTGAGG TCGTGGTGCC ACCGGGTTTC GCCGAGGTAC GACCGTTCCG GCGCGGGATC
GCCGTGGTTC GCCGGGAGGG GTGGGGCGCG GTTGACCGCG CCGGCCGGCT GGTGGTCCCG
ACCCGCTACC ACGGATTCGC CACCGTGCTC GCGGACGATT CACCGGTGGA CGGCTTCACC
GACGACGGTT TGGCCGTCGT GGACCTGGCC GGACGGTACG GGGTGGTGGA CCGAACCGGG
CAGGTGGTCG TGCCACCAGC GCACGCGGCG CTGGTGGTGC ACCCCGTGGC CTTCTTGGTG
GCGACGGCCG CCGGGCGGTG GGGGGCACTG GACCGGCAGG GTGAGCCGCT GATCGACCCG
ACTCACACCG ACCGGGCCAT GGTGCTCGCC GAGATCGATC AACTGCTCAC CGACGCGGTG
CCGGTTCTCT GA
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| Protein sequence | MNRGYGDRWH HAAEPPWMFE PTNEWRPQFP GQRYPGDIDI EHTPRPAPRG RAAVVGRAEI
PPLAPTRPDG TYVGRSWDEQ DDRRTRHDDE TYRRPHDEAY RRGELPRVDD RGRRPEPLNA
RGGEPHWERG NRDETGRGRY ADHGRYDDRR PRHEPGGRDQ PVSPARHPEP GWLPEPDEEL
PRGHDHYAFG RDAGEPPPGT RYPWGRPGGP DRGRPGEPPL SDDGRSKPDW SGATRDGDVN
PYPRRHPAGP GHPAGRDAPS PHRDAAPGPG RHPGRYAAQP PNPNRRPDTA APWPPPGPPR
PGPDQPAPQR GRPHGPPLPP PSRSRQGGLP TDTPRAPYGR PVSGTPNGPT SGAPSRPASG
TTGTPPPPRP PQGHPGDDVP RRPPPPVPGM AGPPPVRPVS PAAGNHRDRT DQARTDTGAD
RETGSPPGTA PWQPRRYVPP PASPPLTTEP APAAGPPPGR NGPGAWFGPA VSPSKAAPSD
PAAPSPTAAS DRSVEGSDAT SPPPPAAPAG ASTDTAPGRA TADTEPTETA PAAVADTTND
TEPTDTAEDT EPGRATANTE PTDTAANTQP GRAAPAAVAD TTNDTEPTDT AANTQPGHAA
PAAVIGSDDI VDDRPTPVDD DALTESSDST HADADAESAP EGAQVPVEPA PPLTPSPSAE
SIQVISAPPA PQPEGDPAET PKAAAPPSEA PAPVAAATPT ARHDMPPAGD TAPADPERVL
ANHPWRLDPT TLREVVTDPE QFRGLRHRLT EKLDTAIDNR SRARLLSLRA VVSRAAGDLD
DALADGRLAL TYAEATGELR RSALAQARLA HVLRWRGEYD EADRLFAQAN SPELPDRLRA
ALHEHAGRCC VDQGRLVEAC VHFERALDLR GTADPTLLDR VRVSLDAVAD RAAATGFGPY
PRSRAEVLEP ERPPVPARDG SLWGYADPNG DLVVAAEYAE VQPFQEGLAW ARRPDDQRWS
LLDRTGTTVL AASWLEAGPF ADGLAWVSQG EPGGWCAIDP RGEVVVPPGF AEVRPFRRGI
AVVRREGWGA VDRAGRLVVP TRYHGFATVL ADDSPVDGFT DDGLAVVDLA GRYGVVDRTG
QVVVPPAHAA LVVHPVAFLV ATAAGRWGAL DRQGEPLIDP THTDRAMVLA EIDQLLTDAV
PVL
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